RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ATP6V0D1P61421 351 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 CDKL1Q00532 357 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 B3GNT6Q6ZMB0 384 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 MIER2Q8N344 545 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PTERQ96BW5 349 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 TRMT2BQ96GJ1 504 aaKnown RBP24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 AARSD1Q9BTE6 412 aaKnown RBP24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PFDN4Q9NQP4 134 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 POLR3BQ9NW08 1133 aaPredicted RBP24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 CNTN5O94779 1100 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 ZNF37AP17032 561 aaPredicted RBP24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 KCNC1P48547 511 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PLD1Q13393 1074 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 CAMK1Q14012 370 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 TAF12Q16514 161 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 C6orf10Q5SRN2 563 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 C6orf52Q5T4I8 152 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PGBD5Q8N414 524 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 GALNT4Q8N4A0 578 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 TBATAQ96M53 351 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 AKTIPQ9H8T0 292 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 CATSPERZQ9NTU4 200 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 CDK14O94921 469 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 GOT2P00505 430 aaKnown RBP24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 EFEMP1Q12805 493 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 IHHQ14623 411 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 C5orf22Q49AR2 442 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 PABPC1LQ4VXU2 614 aaKnown RBP24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 PPP4R4Q6NUP7 873 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF549Q6P9A3 640 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 SPATA19Q7Z5L4 167 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 FUNDC1Q8IVP5 155 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 PTGR2Q8N8N7 351 aaPredicted RBP24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 FAM156AQ8NDB6 213 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 OR4L1Q8NH43 312 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 STAG3L4Q8TBR4 150 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 TRPC4APQ8TEL6 797 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 KIAA1191Q96A73 305 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 SLCO4A1Q96BD0 722 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 SEMA3CQ99985 751 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 DERL2Q9GZP9 239 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 PCDHAC1Q9H158 963 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 COQ10BQ9H8M1 238 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 VPS9D1Q9Y2B5 631 aa24.76■■□□□ 1.55
RUNDC3A-201ENST00000225441 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 TYW5A2RUC4 315 aaKnown RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ANKRD33BA6NCL7 494 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 PDLIM1O00151 329 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 HNRNPRO43390 633 aaKnown RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 KERAO60938 352 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 PGM3O95394 542 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 NDST3O95803 873 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 GLUD1P00367 558 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 LBPP18428 481 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CD9P21926 228 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 IRS1P35568 1242 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 STC1P52823 247 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 GPM6BQ13491 265 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF235Q14590 738 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 TMEM259Q4ZIN3 620 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 OGFOD2Q6N063 350 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCDC149Q6ZUS6 474 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CARM1Q86X55 608 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 KREMEN2Q8NCW0 462 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 IGSF8Q969P0 613 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF512Q96ME7 567 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ATOH8Q96SQ7 321 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 NUSAP1Q9BXS6 441 aaKnown RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 PBX4Q9BYU1 374 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 RBM38Q9H0Z9 239 aaKnown RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCM2LQ9NUG4 571 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 MARCH2Q9P0N8 246 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 DNAJC15Q9Y5T4 150 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 A0A0J9YYE9 177 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 H3BNC9 293 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 VILLO15195 856 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 C7P10643 843 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 IDO1P14902 403 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 SH3BP2P78314 561 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 INPP5AQ14642 412 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CLEC6AQ6EIG7 209 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 DNAJB7Q7Z6W7 309 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ZNF354CQ86Y25 554 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 LRTOMTQ8WZ04 291 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCT7Q99832 543 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 C1QTNF3Q9BXJ4 246 aa24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 SDR39U1Q9NRG7 319 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 ARIH1Q9Y4X5 557 aaPredicted RBP24.75■■□□□ 1.55
RUNDC3A-201ENST00000225441 CCDC162PA2VCL2 907 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 SYCE1LA8MT33 242 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 SERPINF2P08697 491 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 ALDOCP09972 364 aaKnown RBP24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 CES1P23141 567 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 SLC7A2P52569 658 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 TUBA4AP68366 448 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 TIAL1Q01085 375 aaKnown RBP eCLIP24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 NADK2Q4G0N4 442 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 C10orf120Q5SQS8 335 aa24.74■■□□□ 1.55
RUNDC3A-201ENST00000225441 RBM44Q6ZP01 1051 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms