RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TFB2MQ9H5Q4 396 aaKnown RBP14.52□□□□□ -0.08
CNOT3-201ENST00000221232 SOX17Q9H6I2 414 aaPredicted RBP14.52□□□□□ -0.08
CNOT3-201ENST00000221232 AGO1Q9UL18 857 aaKnown RBP14.52□□□□□ -0.08
CNOT3-201ENST00000221232 COMMD3-BMI1R4GMX3 469 aa14.52□□□□□ -0.08
CNOT3-201ENST00000221232 MYO16Q9Y6X6 1858 aa14.52□□□□□ -0.08
CNOT3-201ENST00000221232 C2orf81A6NN90 581 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 AP1G1O43747 822 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 RHOCP08134 193 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 PIK3CGP48736 1102 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 HK3P52790 923 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 ACVR1Q04771 509 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 TRAP1Q12931 704 aaKnown RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 LCP2Q13094 533 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 LSAMPQ13449 338 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 TIGD2Q4W5G0 525 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 RNF219Q5W0B1 726 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 RNF180Q86T96 592 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 AHI1Q8N157 1196 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 FAM47BQ8NA70 645 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 TSPAN14Q8NG11 270 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 OR2T11Q8NH01 316 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 SYTL2Q9HCH5 934 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 NLE1Q9NVX2 485 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 MARCH5Q9NX47 278 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 PDE4DIPQ5VU43 2346 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 SMIM31A0A1B0GVY4 71 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 E5RI56 91 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 HTRA2O43464 458 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 CA12O43570 354 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 SNX2O60749 519 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 KERAO60938 352 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 GUCA1CO95843 209 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 IGLV3-27P01718 113 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 FGF4P08620 206 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 SLC6A2P23975 617 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 PCSK6P29122 969 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 MAPKAPK2P49137 400 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF140P52738 457 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 CYP51A1Q16850 503 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 TRAF7Q6Q0C0 670 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF513Q8N8E2 541 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 GPR150Q8NGU9 434 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 BIRC8Q96P09 236 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 MRPS26Q9BYN8 205 aaKnown RBP14.52□□□□□ -0.09
CNOT3-201ENST00000221232 IL37Q9NZH6 218 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 ZMYM5Q9UJ78 669 aa14.52□□□□□ -0.09
CNOT3-201ENST00000221232 DHRS12A0PJE2 317 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 FXYD1O00168 92 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 SYN3O14994 580 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 STX7O15400 261 aaKnown RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 CORO1AP31146 461 aaKnown RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 OR1D2P34982 312 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 SLC26A3P40879 764 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 MAGEA11P43364 429 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ACADVLP49748 655 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 NFKB2Q00653 900 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 GPR17Q13304 367 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ATXN7L2Q5T6C5 722 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 BCL7CQ8WUZ0 217 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 EVLQ9UI08 416 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 TRMT6Q9UJA5 497 aaKnown RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 DNMT3LQ9UJW3 386 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 LRFN2Q9ULH4 789 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 PTPRDP23468 1912 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 GIPC1O14908 333 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 CYBBP04839 570 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ALPIP09923 528 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 PSMD8P48556 350 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 SLC11A2P49281 568 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF177Q13360 481 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 C8orf82Q6P1X6 216 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 GPSM1Q86YR5 675 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 CHERPQ8IWX8 916 aaKnown RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 FNDC5Q8NAU1 212 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 STON2Q8WXE9 905 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF597Q96LX8 424 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 PSKH2Q96QS6 385 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 MGME1Q9BQP7 344 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 TM6SF2Q9BZW4 377 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 RNF38Q9H0F5 515 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 INTS7Q9NVH2 962 aaKnown RBP14.51□□□□□ -0.09
CNOT3-201ENST00000221232 PCDHB9Q9Y5E1 797 aa14.51□□□□□ -0.09
CNOT3-201ENST00000221232 FAM92AA1XBS5 289 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 TBKBP1A7MCY6 615 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 COCHO43405 550 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 EPOP01588 193 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 SLC10A3P09131 477 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 PKMP14618 531 aaKnown RBP14.5□□□□□ -0.09
CNOT3-201ENST00000221232 GKP32189 559 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 HSPA13P48723 471 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 KCNK10P57789 538 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 RPL26P61254 145 aaKnown RBP14.5□□□□□ -0.09
CNOT3-201ENST00000221232 MRPL58Q14197 206 aaKnown RBP14.5□□□□□ -0.09
CNOT3-201ENST00000221232 GALNT7Q86SF2 657 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 TMEM126BQ8IUX1 230 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 CMTR2Q8IYT2 770 aaKnown RBP14.5□□□□□ -0.09
CNOT3-201ENST00000221232 ZNF786Q8N393 782 aa14.5□□□□□ -0.09
CNOT3-201ENST00000221232 RHEBL1Q8TAI7 183 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms