RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PRR5-ARHGAP8B1AHC4 643 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SLC7A4O43246 635 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TGFB1I1O43294 461 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KCNQ2O43526 872 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MRPS14O60783 128 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 IFNA7P01567 189 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FGFR3P22607 806 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FLT3P36888 993 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SCNN1GP51170 649 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RORCP51449 518 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 HUNKP57058 714 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TAS2R41P59536 307 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ARHGAP8P85298 464 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SEMA5AQ13591 1074 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CNPY1Q3B7I2 92 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 BAIAP2L2Q6UXY1 529 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ARMC8Q8IUR7 673 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 REM2Q8IYK8 340 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 IZUMO1Q8IYV9 350 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SCAIQ8N9R8 606 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZNF248Q8NDW4 579 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CAPSLQ8WWF8 208 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NTAN1Q96AB6 310 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 POPDC3Q9HBV1 291 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GLOD4Q9HC38 313 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NOCTQ9UK39 431 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NCKAP1Q9Y2A7 1128 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 AP1M2Q9Y6Q5 423 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TRPM3Q9HCF6 1732 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 PHIPQ8WWQ0 1821 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SLC15A5A6NIM6 579 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SYN3O14994 580 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 HPRP00739 348 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CTSHP09668 335 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ITGAXP20702 1163 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GSSP48637 474 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 IDH2P48735 452 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 ARHGDIBP52566 201 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 DNAJB13P59910 316 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 IRF8Q02556 426 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PRKD1Q15139 912 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 HLA-DQA1Q5Y7H0 255 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NIPAL1Q6NVV3 410 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 BEND5Q7L4P6 421 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SLITRK4Q8IW52 837 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PM20D2Q8IYS1 436 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PLD5Q8N7P1 536 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ITFG2Q969R8 447 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NFKBIZQ9BYH8 718 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ARL8BQ9NVJ2 186 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 DNAJB9Q9UBS3 223 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KLQ9UEF7 1012 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TCAF1Q9Y4C2 921 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PDLIM1O00151 329 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 IFNA16P05015 189 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ACADMP11310 421 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RHOQP17081 205 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GOT1P17174 413 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GNAZP19086 355 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 L1CAMP32004 1257 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PBX3P40426 434 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PRR5P85299 388 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TAF5Q15542 800 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CRY2Q49AN0 593 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CAPN13Q6MZZ7 669 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 SPESP1Q6UW49 350 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 USP50Q70EL3 339 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 SEC14L1Q92503 715 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RERGQ96A58 199 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 CSPG4P5Q96PW8 444 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RAB11FIP5Q9BXF6 653 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ADAMTS10Q9H324 1103 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ABCB10Q9NRK6 738 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 C1QTNF3-AMACRE9PGA6 284 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MAGEB3O15480 346 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NADKO95544 446 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 ESR1P03372 595 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 C4BPAP04003 597 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 GSTM3P21266 225 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 EPHA3P29320 983 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PTGER3P43115 390 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GABARAPL2P60520 117 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 LIPEQ05469 1076 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PLCL1Q15111 1095 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TAF1AQ15573 450 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 KLHL35Q6PF15 583 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KRT77Q7Z794 578 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ADGRG6Q86SQ4 1221 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RANBP3LQ86VV4 465 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 TRPV3Q8NET8 790 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 OR5K1Q8NHB7 308 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TWIST2Q8WVJ9 160 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 LBHD1Q9BQE6 289 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 GPATCH1Q9BRR8 931 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 SLC22A4Q9H015 551 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MED28Q9H204 178 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms