RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 IL26Q9NPH9 171 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ZMYM5Q9UJ78 669 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 FIS1Q9Y3D6 152 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 COPG1Q9Y678 874 aaKnown RBP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 SCN8AQ9UQD0 1980 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 ZNF106Q9H2Y7 1883 aaKnown RBP29.46■■■□□ 2.31
PABPN1-201ENST00000216727 SUPT3HB4E1H0 165 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 CDC7O00311 574 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 GPR39O43194 453 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 SUPT3HO75486 399 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 SIX3O95343 332 aaPredicted RBP29.46■■■□□ 2.31
PABPN1-201ENST00000216727 CLDN7O95471 211 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 ZNF7P17097 686 aaPredicted RBP29.46■■■□□ 2.31
PABPN1-201ENST00000216727 CLCN7P51798 805 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 NFATC2Q13469 925 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 CAMK1Q14012 370 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 PRSS36Q5K4E3 855 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 SPHK2Q9NRA0 654 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 TMCO1Q9UM00 188 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 NOTCH4Q99466 2003 aa29.46■■■□□ 2.31
PABPN1-201ENST00000216727 TRBV5-4A0A0C4DH59 114 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 STX16-NPEPL1H3BU86 382 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 BTN3A1O00481 513 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 STX16O14662 325 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 PABPC1P11940 636 aaKnown RBP29.45■■■□□ 2.31
PABPN1-201ENST00000216727 BMP1P13497 986 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 TCF3P15923 654 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 EPCAMP16422 314 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 ITGALP20701 1170 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 IRS1P35568 1242 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 PTPN5P54829 565 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 DMC1Q14565 340 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 LYPLAL1Q5VWZ2 237 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 PGM2L1Q6PCE3 622 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 SERPINA9Q86WD7 417 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 PDLIM5Q96HC4 596 aaKnown RBP29.45■■■□□ 2.31
PABPN1-201ENST00000216727 C1QTNF3Q9BXJ4 246 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 SUV39H2Q9H5I1 410 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 G3BP2Q9UN86 482 aaKnown RBP29.45■■■□□ 2.31
PABPN1-201ENST00000216727 DHRS7Q9Y394 339 aa29.45■■■□□ 2.31
PABPN1-201ENST00000216727 CCNT2O60583 730 aaKnown RBP29.45■■■□□ 2.3
PABPN1-201ENST00000216727 CDK14O94921 469 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 CDH13P55290 713 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 ACTR3P61158 418 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 SH3BP2P78314 561 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 CYLC2Q14093 348 aaPredicted RBP29.45■■■□□ 2.3
PABPN1-201ENST00000216727 SNX32Q86XE0 403 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 EEF1AKMT1Q8WVE0 214 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 LINGO1Q96FE5 620 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 SCRN2Q96FV2 425 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 ASB8Q9H765 288 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 MYOFQ9NZM1 2061 aa29.45■■■□□ 2.3
PABPN1-201ENST00000216727 ALPK3Q96L96 1907 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 NPEPPSL1A6NEC2 478 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 CLASP2O75122 1294 aaKnown RBP29.44■■■□□ 2.3
PABPN1-201ENST00000216727 PSMG1O95456 288 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 BPIP17213 487 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 ZRSR2Q15696 482 aaKnown RBP29.44■■■□□ 2.3
PABPN1-201ENST00000216727 UGT3A2Q3SY77 523 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 CARD16Q5EG05 197 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 GRAMD4Q6IC98 578 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 ELMSAN1Q6PJG2 1045 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 TXNDC11Q6PKC3 985 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 RBFAQ8N0V3 343 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 STMN2Q93045 179 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 OTUB2Q96DC9 234 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 H0Y3Z8 333 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 POP4O95707 220 aaKnown RBP29.44■■■□□ 2.3
PABPN1-201ENST00000216727 TYRP14679 529 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 TSPAN8P19075 237 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 TPRG1Q6ZUI0 275 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 DEFB107AQ8IZN7 70 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 DNAJC5GQ8N7S2 189 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 ZNF641Q96N77 438 aaPredicted RBP29.44■■■□□ 2.3
PABPN1-201ENST00000216727 PANX3Q96QZ0 392 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 CLPBQ9H078 707 aa29.44■■■□□ 2.3
PABPN1-201ENST00000216727 GLYATL1P3A0A0U1RQE8 302 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 RPS17P08708 135 aaKnown RBP29.43■■■□□ 2.3
PABPN1-201ENST00000216727 SPAM1P38567 509 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 ECT2LQ008S8 904 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 GPR33Q49SQ1 333 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 CLEC6AQ6EIG7 209 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 CYHR1Q6ZMK1 362 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 RIPOR1Q6ZS17 1223 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 CPNE9Q8IYJ1 553 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 MCCC1Q96RQ3 725 aaPredicted RBP29.43■■■□□ 2.3
PABPN1-201ENST00000216727 LINC00597Q9H2U6 94 aa29.43■■■□□ 2.3
PABPN1-201ENST00000216727 NPIPB15A6NHN6 443 aaPredicted RBP29.42■■■□□ 2.3
PABPN1-201ENST00000216727 RB1P06400 928 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 HSPA1AP0DMV8 641 aaKnown RBP29.42■■■□□ 2.3
PABPN1-201ENST00000216727 HSPA1BP0DMV9 641 aaKnown RBP29.42■■■□□ 2.3
PABPN1-201ENST00000216727 EEF1DP29692 281 aaKnown RBP29.42■■■□□ 2.3
PABPN1-201ENST00000216727 CCNHP51946 323 aaPredicted RBP29.42■■■□□ 2.3
PABPN1-201ENST00000216727 LCP2Q13094 533 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 ANKS6Q68DC2 871 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 MID1IP1Q9NPA3 183 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 MARK1Q9P0L2 795 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 CDH22Q9UJ99 828 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 GNPTGQ9UJJ9 305 aa29.42■■■□□ 2.3
PABPN1-201ENST00000216727 C15orf41Q9Y2V0 281 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms