RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RFLNAQ6ZTI6 216 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MTDHQ86UE4 582 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MAGEC3Q8TD91 643 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TMEM237Q96Q45 408 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 P2RY12Q9H244 342 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PCDH12Q9NPG4 1184 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZDHHC4Q9NPG8 344 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 HCN2Q9UL51 889 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 C16orf96A6NNT2 1141 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 AGAP14A8MT82 685 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 A8MUI8 341 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TRIM13O60858 407 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 LYPLA1O75608 230 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ESR1P03372 595 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF30P17039 623 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UGT1A6P19224 532 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UGT1A1P22309 533 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UGT1A4P22310 534 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UGT1A3P35503 534 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UGT1A5P35504 534 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SLC1A6P48664 564 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ACAP2Q15057 778 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 LRIT3Q3SXY7 679 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KLC3Q6P597 504 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TTC7BQ86TV6 843 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 HCAR2Q8TDS4 363 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SLC7A6OSQ96CW6 309 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 A0A0G2JND7 137 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GOLGA8CPA6NN73 597 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KPNA3O00505 521 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 NIPSNAP2O75323 286 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ATP5HO75947 161 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CBX6O95503 412 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PRNPP04156 253 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SPINT3P49223 89 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PTPN5P54829 565 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ARHGEF7Q14155 803 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ELAVL3Q14576 367 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GPR33Q49SQ1 333 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SWT1Q5T5J6 900 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MTSS1LQ765P7 747 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PARS2Q7L3T8 475 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UCMAQ8WVF2 138 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 NECTIN4Q96NY8 510 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PLEKHG4BQ96PX9 1271 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GPR21Q99679 349 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 LRMDAQ9H2I8 198 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZFP69BQ9UJL9 534 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 STK38LQ9Y2H1 464 aa19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 OAS3Q9Y6K5 1087 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PRMT5O14744 637 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 DLX3O60479 287 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CYP2A6P11509 494 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 POU3F3P20264 500 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ACRV1P26436 265 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 VIPR1P32241 457 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 IL12RB1P42701 662 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 METAP1P53582 386 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SPDYAQ5MJ70 313 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 LIPMQ5VYY2 423 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PAQR3Q6TCH7 311 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CLNKQ7Z7G1 428 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ISCA2Q86U28 154 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KCNJ9Q92806 393 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 BOCQ9BWV1 1114 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FBRSL1Q9HCM7 1045 aaKnown RBP19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 EPS15L1Q9UBC2 864 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GALPQ9UBC7 116 aa19.52■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CD1DP15813 335 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 CD9P21926 228 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 GRIA2P42262 883 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SOX9P48436 509 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 HTR4Q13639 388 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 CRLF3Q8IUI8 442 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SREK1Q8WXA9 508 aaKnown RBP19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 OR8D1Q8WZ84 308 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SGF29Q96ES7 293 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 ACOX2Q99424 681 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SORT1Q99523 831 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SLC30A3Q99726 388 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 THAP10Q9P2Z0 257 aaPredicted RBP19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 CRLS1Q9UJA2 301 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 PPM1HQ9ULR3 514 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 COMMD10Q9Y6G5 202 aa19.52■□□□□ 0.71
TNFRSF1A-201ENST00000162749 ZBTB14O43829 449 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 VPS26AO75436 327 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 RBP1P09455 135 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 ZNF7P17097 686 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 TFEBP19484 476 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 IGFBP4P22692 258 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 NFKBIAP25963 317 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 PPARGP37231 505 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 ARFIP2P53365 341 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 RALGDSQ12967 914 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 ZDHHC20Q5W0Z9 365 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 RBFAQ8N0V3 343 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 NXPE1Q8N323 547 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 SUSD6Q92537 303 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 PTERQ96BW5 349 aa19.51■□□□□ 0.71
TNFRSF1A-201ENST00000162749 GATA5Q9BWX5 397 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms