RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
PKP2-201ENST00000070846 C2orf78A6NCI8 922 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 BEST1O76090 585 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 PROCP04070 461 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 PTGER3P43115 390 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 RAD23AP54725 363 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 RCN1Q15293 331 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 FAM98BQ52LJ0 330 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 C10orf107Q8IVU9 208 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 CLHC1Q8NHS4 586 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 AZIN2Q96A70 460 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 TOX2Q96NM4 488 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 BTBD9Q96Q07 612 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ADAM7Q9H2U9 754 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 SLCO1B3Q9NPD5 702 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 TIMM22Q9Y584 194 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 CCDC162PA2VCL2 907 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 SLC7A4O43246 635 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ITPKBP27987 946 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 CMPK1P30085 196 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 GKP32189 559 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 CLK1P49759 484 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 PKNOX1P55347 436 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 TAS2R39P59534 338 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 PITX1P78337 314 aaPredicted RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 MYLK3Q32MK0 819 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 C22orf39Q6P5X5 142 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 SRFBP1Q8NEF9 429 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 SPATA6Q9NWH7 488 aaPredicted RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 OSER1Q9NX31 292 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 USE1Q9NZ43 259 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 CA14Q9ULX7 337 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 BACE2Q9Y5Z0 518 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 MANFP55145 182 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ICE2Q659A1 982 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 CLDN19Q8N6F1 224 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 ZNF599Q96NL3 588 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
PKP2-201ENST00000070846 PPIEQ9UNP9 301 aaKnown RBP11.32□□□□□ -0.6
PKP2-201ENST00000070846 A0A0D9SEW6 157 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 LAMTOR5O43504 91 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 OR1F1O43749 312 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PDE5AO76074 875 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 KAT7O95251 611 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CLDN7O95471 211 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 UQCRBP14927 111 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 ZNF8P17098 575 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 CLCNKAP51800 687 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CLLU1OSQ5K130 101 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 ZBTB49Q6ZSB9 765 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 RAP2CQ9Y3L5 183 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 TRAF6Q9Y4K3 522 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CFAP20Q9Y6A4 193 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 LCA5LO95447 670 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 CBX6O95503 412 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 OGDHQ02218 1023 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PPIDQ08752 370 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 CHIT1Q13231 466 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 TAF1AQ15573 450 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 TSNQ15631 228 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 LDLRAP1Q5SW96 308 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 INTS11Q5TA45 600 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 IYDQ6PHW0 289 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 Q6ZVL8 140 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 C14orf80Q86SX3 495 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 PPCDCQ96CD2 204 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 RAD21L1Q9H4I0 556 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 IGSF9Q9P2J2 1179 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 SLCO3A1Q9UIG8 710 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 SNTNA6NMZ2 147 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 SCN2BO60939 215 aa11.31□□□□□ -0.6
PKP2-201ENST00000070846 RPL3P39023 403 aaKnown RBP11.31□□□□□ -0.6
PKP2-201ENST00000070846 RAB33AQ14088 237 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms