RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cpne9Q1RLL3 553 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kcnk9Q3LS21 402 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pnrc1Q3TWH3 297 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Brms1lQ3U1T3 323 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kcnh1Q60603 989 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RhocQ62159 193 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Aoc2Q812C9 757 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp719Q8BIV1 735 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam221bQ8C627 487 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ftsj1Q8CBC7 324 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Q8CC96 669 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 4932414N04RikQ8CEQ9 752 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrrc66Q8K0B3 872 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Taf10Q8K0H5 218 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Appl1Q8K3H0 707 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sbk1Q8QZX0 417 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn1r214Q8R279 367 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr273Q8VG87 317 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Exoc2Q9D4H1 924 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Spock2Q9ER58 423 aa9.68□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm12248A0A1W2P8B8 313 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp882E9Q4R4 555 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PuraP42669 321 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 ArsaP50428 506 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ufm1P61961 85 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kir3dl1P83555 432 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Colec11Q3SXB8 272 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Uimc1Q5U5Q9 727 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc6a3Q61327 619 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MafkQ61827 156 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rbl1Q64701 1063 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mvb12bQ6KAU4 317 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dusp11Q6NXK5 321 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tlr12Q6QNU9 906 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rps9Q6ZWN5 194 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr412Q7TRW7 312 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Msantd1Q8BIL2 278 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Svs2Q8BS30 375 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Asb14Q8C6Y6 587 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc46a2Q8CA03 479 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ssh3Q8K330 649 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GaleQ8R059 347 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nae1Q8VBW6 534 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr570Q8VH12 312 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lgals12Q91VD1 314 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 HnrnpabQ99020 285 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Atp6ap2Q9CYN9 350 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 2010109A12RikQ9D875 119 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Aldh1a3Q9JHW9 512 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il20Q9JKV9 176 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gria3Q9Z2W9 888 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 IsxA1A546 240 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zmynd12A2BGJ5 363 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ifi213D3Z5G0 586 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Map2k3O09110 347 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gabrr2P56476 465 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pou1f1Q00286 291 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrrc58Q3UGP9 366 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ccdc185Q3V118 621 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Xkr4Q5GH67 647 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Prrt3Q6PE13 971 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ldhal6bQ8BVP2 382 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PigwQ8C398 503 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hacd3Q8K2C9 362 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Itgbl1Q8VDV0 494 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 OptcQ920A0 328 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Q9D1Z2 194 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Krt28A6BLY7 462 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm13212B1ASQ7 799 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r73D3Z7M3 851 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm6614M0QWR8 670 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Polr2jO08740 117 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Prkag1O54950 330 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 DdcO88533 480 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 SagP20443 403 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Irs1P35569 1233 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Csf3rP40223 837 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tmem207P86045 143 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kansl1lQ5DTI6 991 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sema4aQ62178 760 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 VwdeQ6DFV8 926 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pfkfb4Q6DTY7 469 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cpsf6Q6NVF9 551 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lpcat4Q6NVG1 524 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Serpina12Q7TMF5 413 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ugt2a1Q80X89 528 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tbc1d10bQ8BHL3 798 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lpcat2Q8BYI6 544 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dapk2Q8VDF3 370 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Map3k21Q8VDG6 1002 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 DenrQ9CQJ6 198 aaKnown RBP9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vps28Q9D1C8 221 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dclre1aQ9JIC3 1026 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il18rapQ9Z2B1 614 aa9.67□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm21083A0A0G2JFD5 256 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Adh6bA0A1D5RMB0 384 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RerglB2RVE2 204 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pate3B3GLJ3 98 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 FanceB8JJD6 213 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam151bD3YUE4 279 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms