RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	CPNE6	O95741	557 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	FUCA1	P04066	466 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	SFTPC	P11686	197 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	PNLIP	P16233	465 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	MPST	P25325	297 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	AK4	P27144	223 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ALDH4A1	P30038	563 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CSF2RB	P32927	897 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	PTPN7	P35236	360 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ARSE	P51690	589 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZNF135	P52742	658 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	POLE2	P56282	527 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	TFDP2	Q14188	446 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	AGER	Q15109	404 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ANKRD20A8P	Q5CZ79	823 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CFAP58	Q5T655	872 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	NKAIN2	Q5VXU1	208 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ERAP2	Q6P179	960 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	BORA	Q6PGQ7	559 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	LIPI	Q6XZB0	460 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	RFX8	Q6ZV50	586 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	PIM3	Q86V86	326 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	NRROS	Q86YC3	692 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CREG2	Q8IUH2	290 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	RASGEF1C	Q8N431	466 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	TSEN2	Q8NCE0	465 aa	Known RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ATL2	Q8NHH9	583 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ACTRT1	Q8TDG2	376 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	MAIP1	Q8WWC4	291 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CASKIN2	Q8WXE0	1202 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	TMEM159	Q96B96	161 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	HAUS1	Q96CS2	278 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CSPG4P5	Q96PW8	444 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	AP1M1	Q9BXS5	423 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CARS2	Q9HA77	564 aa	Known RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	CWC15	Q9P013	229 aa	Known RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	RCOR3	Q9P2K3	495 aa	Predicted RBP	10	□□□□□ -0.81
PHGDH-222	ENST00000641587	RNF14	Q9UBS8	474 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	ST14	Q9Y5Y6	855 aa		10	□□□□□ -0.81
PHGDH-222	ENST00000641587	TCRBV7S2A1N4T	A0A589	114 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	TTC24	A2A3L6	582 aa	Predicted RBP	9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CTAGE15	A4D2H0	777 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	PDE2A	O00408	941 aa	Predicted RBP	9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	DUX1	O43812	170 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CST8	O60676	142 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	ECEL1	O95672	775 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	FGF1	P05230	155 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	ELFN1	P0C7U0	828 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CTAGE8	P0CG41	777 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CCNB1	P14635	433 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	AMPD1	P23109	780 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CD82	P27701	267 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	UGT1A3	P35503	534 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	SUOX	P51687	545 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	KCNAB2	Q13303	367 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	PARP15	Q460N3	678 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	BRAT1	Q6PJG6	821 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	TMCO3	Q6UWJ1	677 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CTAGE6	Q86UF2	777 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	VSIG1	Q86XK7	387 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CTAGE4	Q8IX94	777 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	IL22RA1	Q8N6P7	574 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CEP112	Q8N8E3	955 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZDHHC1	Q8WTX9	485 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	ART4	Q93070	314 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	RNF157	Q96PX1	679 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	HERPUD2	Q9BSE4	406 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	CARD6	Q9BX69	1037 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	RETREG1	Q9H6L5	497 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	LRRC19	Q9H756	370 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	WDR26	Q9H7D7	661 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	B3GALT1	Q9Y5Z6	326 aa		9.99	□□□□□ -0.81
PHGDH-222	ENST00000641587	RHPN2P1	A8MT19	583 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	WASH4P	A8MWX3	477 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZNF487	B1APH4	448 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	FGF10	O15520	208 aa	Predicted RBP	9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	PRAMEF11	O60813	436 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	PRKAR1A	P10644	381 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZFX	P17010	805 aa	Predicted RBP	9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	CD1C	P29017	333 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	HTR7	P34969	479 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	TRIM23	P36406	574 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	POLD2	P49005	469 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ATP1A2	P50993	1020 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	YBEY	P58557	167 aa	Predicted RBP	9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	C2orf54	Q08AI8	447 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	DPYS	Q14117	519 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	UBAP2L	Q14157	1087 aa	Known RBP	9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	NR1D2	Q14995	579 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ACOX1	Q15067	660 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	PTPRR	Q15256	657 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	TAZ	Q16635	292 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	TMEM164	Q5U3C3	297 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	PNCK	Q6P2M8	343 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	SLC30A9	Q6PML9	568 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ARHGAP36	Q6ZRI8	547 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	BBS12	Q6ZW61	710 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	ZNF438	Q7Z4V0	828 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	SRL	Q86TD4	932 aa		9.98	□□□□□ -0.81
PHGDH-222	ENST00000641587	HEATR4	Q86WZ0	1026 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms