RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 BAG2O95816 211 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 RHOAP61586 193 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 TRAF2Q12933 501 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 BLMHQ13867 455 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 SHHQ15465 462 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 TAF1AQ15573 450 aaPredicted RBP15.03■□□□□ -0
TRIM3-215ENST00000639856 ZNF678Q5SXM1 525 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 GLT6D1Q7Z4J2 308 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 OR6K2Q8NGY2 324 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 SLC26A7Q8TE54 656 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 PYDC1Q8WXC3 89 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 TM6SF2Q9BZW4 377 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 MRGBPQ9NV56 204 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 POLR3BQ9NW08 1133 aaPredicted RBP15.03■□□□□ -0
TRIM3-215ENST00000639856 INTS6Q9UL03 887 aaKnown RBP15.03■□□□□ -0
TRIM3-215ENST00000639856 LRCH1Q9Y2L9 728 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 YBX2Q9Y2T7 364 aaKnown RBP15.03■□□□□ -0
TRIM3-215ENST00000639856 C5orf42Q9H799 3197 aa15.03■□□□□ -0
TRIM3-215ENST00000639856 A0A0U1RQS6 177 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 LIN7AO14910 233 aaPredicted RBP15.02■□□□□ -0
TRIM3-215ENST00000639856 SMIM24O75264 130 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 SUPT7LO94864 414 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 RB1P06400 928 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 PFKLP17858 780 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 PSMA3P25788 255 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 PBX2P40425 430 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 HERVK_113P63132 956 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 CBX2Q14781 532 aaPredicted RBP15.02■□□□□ -0
TRIM3-215ENST00000639856 PRSS36Q5K4E3 855 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 MPP7Q5T2T1 576 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 CHSY3Q70JA7 882 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 TMEM25Q86YD3 366 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 EFCAB3Q8N7B9 438 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 MDGA1Q8NFP4 955 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 OR4K2Q8NGD2 314 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 ZNF707Q96C28 371 aaPredicted RBP15.02■□□□□ -0
TRIM3-215ENST00000639856 RCN3Q96D15 328 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 MYCBPQ99417 103 aaPredicted RBP15.02■□□□□ -0
TRIM3-215ENST00000639856 SERPINI1Q99574 410 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 ZNF184Q99676 751 aaPredicted RBP15.02■□□□□ -0
TRIM3-215ENST00000639856 ERVK-6Q9BXR3 956 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 CXorf56Q9H5V9 222 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 TDP1Q9NUW8 608 aa15.02■□□□□ -0
TRIM3-215ENST00000639856 C2orf81A6NN90 581 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 UBFD1O14562 309 aaKnown RBP15.02□□□□□ -0.01
TRIM3-215ENST00000639856 PRSS56P0CW18 603 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 HOXA9P31269 272 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 INHBCP55103 352 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 PDAP1Q13442 181 aaKnown RBP15.02□□□□□ -0.01
TRIM3-215ENST00000639856 GPM6BQ13491 265 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 ARHGAP15Q53QZ3 475 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 INO80DQ53TQ3 878 aaPredicted RBP15.02□□□□□ -0.01
TRIM3-215ENST00000639856 ANO7Q6IWH7 933 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 NCEH1Q6PIU2 408 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 AFTPHQ6ULP2 937 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 KBTBD2Q8IY47 623 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 RHEBL1Q8TAI7 183 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 FIBINQ8TAL6 211 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 FAM136AQ96C01 138 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 HTATIP2Q9BUP3 242 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 C2orf49Q9BVC5 232 aaPredicted RBP15.02□□□□□ -0.01
TRIM3-215ENST00000639856 LINC00597Q9H2U6 94 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 EFCAB1Q9HAE3 211 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 TRAF6Q9Y4K3 522 aa15.02□□□□□ -0.01
TRIM3-215ENST00000639856 XYLBO75191 536 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 FGF19O95750 216 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 HNRNPA1P09651 372 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 CEBPBP17676 345 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 HLA-FP30511 346 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 CTSOP43234 321 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 PLEKHG6Q3KR16 790 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 UNC50Q53HI1 259 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 PGAM4Q8N0Y7 254 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 RYBPQ8N488 228 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 TCF12Q99081 682 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 ABCB8Q9NUT2 735 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 UBA6A0AVT1 1052 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 NEDD8-MDP1E9PL57 170 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 DDX6P26196 483 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 ASTLQ6HA08 431 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 BNC2Q6ZN30 1099 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 RTL10Q7L3V2 364 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 DHDDSQ86SQ9 333 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 LPGAT1Q92604 370 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 RPL10LQ96L21 214 aaKnown RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 TFB2MQ9H5Q4 396 aaKnown RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 SYTL2Q9HCH5 934 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 TAS2R13Q9NYV9 303 aa15.01□□□□□ -0.01
TRIM3-215ENST00000639856 KIAA1522Q9P206 1035 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-215ENST00000639856 REV3LO60673 3130 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 MYO9BQ13459 2157 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ANKRD66B4E2M5 251 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 CYBBP04839 570 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 MTHFD2P13995 350 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 LPOP22079 712 aaPredicted RBP15□□□□□ -0.01
TRIM3-215ENST00000639856 GKP32189 559 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 STK19P49842 368 aaPredicted RBP15□□□□□ -0.01
TRIM3-215ENST00000639856 OR4D1Q15615 310 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ZNF77Q15935 545 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms