RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 RPS27LQ71UM5 84 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 ZC3HC1Q86WB0 502 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 LRTOMTQ8WZ04 291 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 OXSMQ9NWU1 459 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 ADGRE2Q9UHX3 823 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 MYH3P11055 1940 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 GLYATL1P3A0A0U1RQE8 302 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 NEDD8-MDP1E9PL57 170 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 STK16O75716 305 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 KCNE1P15382 129 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 HTR7P34969 479 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 GMPRP36959 345 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 POLR2JP52435 117 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 ROR2Q01974 943 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 LIPEQ05469 1076 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 PAQR3Q6TCH7 311 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 NAPRTQ6XQN6 538 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 OR8H2Q8N162 312 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 TERB1Q8NA31 727 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 OR2T34Q8NGX1 318 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 OR2T3Q8NH03 318 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 PNPT1Q8TCS8 783 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 IGFLR1Q9H665 355 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 PPM1HQ9ULR3 514 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 SAMHD1Q9Y3Z3 626 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 CCDC189A1A4V9 331 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 FAM72CH0Y354 149 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 SLC28A1O00337 649 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 EPORP19235 508 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 ST13P50502 369 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 CRHR2Q13324 411 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 CYP2A13Q16696 494 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 LIN52Q52LA3 116 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 RBM20Q5T481 1227 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 FAM72AQ5TYM5 149 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 FAM72DQ6L9T8 149 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 FRMD7Q6ZUT3 714 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 FAM72BQ86X60 149 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 BRD9Q9H8M2 597 aa14.35□□□□□ -0.11
SCARB2-216ENST00000639300 CLK4Q9HAZ1 481 aaKnown RBP14.35□□□□□ -0.11
SCARB2-216ENST00000639300 IRS2Q9Y4H2 1338 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SNAP91O60641 907 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 BEST1O76090 585 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ADH1AP07327 375 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 OCM2P0CE71 109 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 IMPDH2P12268 514 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 CYP4B1P13584 511 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 NCK1P16333 377 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ZNF37AP17032 561 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 PLD6Q8N2A8 252 aaKnown RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 C10orf53Q8N6V4 93 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 BTN2A2Q8WVV5 523 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ATL1Q8WXF7 558 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 GMPPBQ9Y5P6 360 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SERPINI2O75830 405 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 XRCC1P18887 633 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 THOP1P52888 689 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 BLVRAP53004 296 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 USP46P62068 366 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 PAGE2BQ5JRK9 111 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 REP15Q6BDI9 236 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 REXO5Q96IC2 774 aaKnown RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 RFPL1O75677 317 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SOX6P35712 828 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ACVRL1P37023 503 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SLC10A2Q12908 348 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ARHGAP22Q7Z5H3 698 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 RELL1Q8IUW5 271 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SIDT2Q8NBJ9 832 aaKnown RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 KCTD13Q8WZ19 329 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 COL26A1Q96A83 441 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 DGCR14Q96DF8 476 aaKnown RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 MOCOSQ96EN8 888 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SCLYQ96I15 445 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SLC39A3Q9BRY0 314 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 PRKAG3Q9UGI9 489 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 DAPK2Q9UIK4 370 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 A0A0U1RQF3 1178 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 KCNQ1P51787 676 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 XIAPP98170 497 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SMARCB1Q12824 385 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ITGADQ13349 1161 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 NCF4Q15080 339 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 CASP12Q6UXS9 341 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 OFCC1Q8IZS5 231 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 SVOPQ8N4V2 548 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-216ENST00000639300 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 PROX1Q92786 737 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 REPS1Q96D71 796 aa14.34□□□□□ -0.11
SCARB2-216ENST00000639300 MYOCQ99972 504 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms