RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GPR63Q9BZJ6 419 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 CXorf56Q9H5V9 222 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 IL17CQ9P0M4 197 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 PCDH10Q9P2E7 1040 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 TRMT6Q9UJA5 497 aaKnown RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 ZNF711Q9Y462 761 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 LIN7AO14910 233 aaPredicted RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 AZIN1O14977 448 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 ALPIP09923 528 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 RFC2P35250 354 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 CLCN4P51793 760 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 STX5Q13190 355 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 MMEL1Q495T6 779 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 AARS2Q5JTZ9 985 aaKnown RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 GAREM2Q75VX8 874 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 CAMK1DQ8IU85 385 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 SNX31Q8N9S9 440 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 TWIST2Q8WVJ9 160 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 KCNA7Q96RP8 456 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 ECSITQ9BQ95 431 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 AKTIPQ9H8T0 292 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 PLK2Q9NYY3 685 aa21.38■■□□□ 1.01
CLN6-224ENST00000638076 LSM7Q9UK45 103 aaKnown RBP21.38■■□□□ 1.01
CLN6-224ENST00000638076 NCF1BA6NI72 391 aaPredicted RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 SYCE1LA8MT33 242 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 NCF1CA8MVU1 366 aaPredicted RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 H3BNX3 289 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 CKMP06732 381 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 CLTBP09497 229 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 NCF1P14598 390 aaPredicted RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 CHRM3P20309 590 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 XIAPP98170 497 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 CLCQ05315 142 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 KLC1Q07866 573 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 FLOT2Q14254 428 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 ARMC12Q5T9G4 340 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 LYSMD3Q7Z3D4 306 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 FAM217AQ8IXS0 508 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 CD200R1Q8TD46 325 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 MYO19Q96H55 970 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 C2orf49Q9BVC5 232 aaPredicted RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 UTP6Q9NYH9 597 aaKnown RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 PTGDR2Q9Y5Y4 395 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 GBF1Q92538 1859 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 SMAD6O43541 496 aaKnown RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 TSPAN12O95859 305 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 ME2P23368 584 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 HMGCLP35914 325 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 WDR5P61964 334 aaKnown RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 AP1S1P61966 158 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 CDC16Q13042 620 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 KANK2Q63ZY3 851 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 EEF1AKMT1Q8WVE0 214 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 MAGEE1Q9HCI5 957 aa21.37■■□□□ 1.01
CLN6-224ENST00000638076 SEMA4BQ9NPR2 832 aaPredicted RBP21.37■■□□□ 1.01
CLN6-224ENST00000638076 E5RI56 91 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 FBP2O00757 339 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 PIP5K1BO14986 540 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 TGM5O43548 720 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 PGLSO95336 258 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 ALDOCP09972 364 aaKnown RBP21.36■■□□□ 1.01
CLN6-224ENST00000638076 CSF2RAP15509 400 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 ITGB8P26012 769 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 PTGER3P43115 390 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 LCP2Q13094 533 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 LRRC36Q1X8D7 754 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 REP15Q6BDI9 236 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 RETSATQ6NUM9 610 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 IRGCQ6NXR0 463 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 HS6ST3Q8IZP7 471 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 OR9I1Q8NGQ6 314 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 PIH1D2Q8WWB5 315 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 MRPS31Q92665 395 aaKnown RBP21.36■■□□□ 1.01
CLN6-224ENST00000638076 MYCBPQ99417 103 aaPredicted RBP21.36■■□□□ 1.01
CLN6-224ENST00000638076 SARS2Q9NP81 518 aaKnown RBP21.36■■□□□ 1.01
CLN6-224ENST00000638076 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.36■■□□□ 1.01
CLN6-224ENST00000638076 EVLQ9UI08 416 aaPredicted RBP21.36■■□□□ 1.01
CLN6-224ENST00000638076 MAFFQ9ULX9 164 aa21.36■■□□□ 1.01
CLN6-224ENST00000638076 A0A1B0GTL3 188 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 LILRB3O75022 631 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 SNRPB2P08579 225 aaKnown RBP21.35■■□□□ 1.01
CLN6-224ENST00000638076 CD9P21926 228 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 IL2P60568 153 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 MS4A2Q01362 244 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 LPCAT4Q643R3 524 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 ANKS6Q68DC2 871 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 PCDH20Q8N6Y1 951 aaKnown RBP21.35■■□□□ 1.01
CLN6-224ENST00000638076 UCMAQ8WVF2 138 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 KCNJ9Q92806 393 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 LINGO1Q96FE5 620 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 CRISPLD2Q9H0B8 497 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 CACNA2D2Q9NY47 1150 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 CFAP97Q9P2B7 532 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 CLEC4EQ9ULY5 219 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 PCDHGA7Q9Y5G6 932 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 SLC30A1Q9Y6M5 507 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 IQCF5A8MTL0 148 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 BMP1P13497 986 aa21.35■■□□□ 1.01
CLN6-224ENST00000638076 ADARP55265 1226 aaKnown RBP21.35■■□□□ 1.01
CLN6-224ENST00000638076 PSME3P61289 254 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms