RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ARHGEF15O94989 841 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 HLA-DPA1P20036 260 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 ARRB2P32121 409 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 BMPR1AP36894 532 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 MTTPP55157 894 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 MED21Q13503 144 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 INSCQ1MX18 579 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 C6orf183Q5T699 404 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 KLHL35Q6PF15 583 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 B3GNT6Q6ZMB0 384 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 CCDC149Q6ZUS6 474 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 CLEC14AQ86T13 490 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 ZNF554Q86TJ5 538 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 HJURPQ8NCD3 748 aaPredicted RBP11.48□□□□□ -0.57
CLN6-217ENST00000636964 ZFPM2Q8WW38 1151 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 NXNL1Q96CM4 212 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 TUBB6Q9BUF5 446 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 VPS51Q9UID3 782 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 STOML2Q9UJZ1 356 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
CLN6-217ENST00000636964 TSC22D4Q9Y3Q8 395 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 CHD9Q3L8U1 2897 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.48□□□□□ -0.57
CLN6-217ENST00000636964 NDST3O95803 873 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 PRLP01236 227 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 FGF1P05230 155 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 RALBP11234 206 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 STMN1P16949 149 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 SLC1A6P48664 564 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 C1QTNF8P60827 252 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 CREMQ03060 361 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 COX10Q12887 443 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
CLN6-217ENST00000636964 C1orf146Q5VVC0 180 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 CRLF3Q8IUI8 442 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 EFHBQ8N7U6 833 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 MRPL43Q8N983 215 aaKnown RBP11.48□□□□□ -0.57
CLN6-217ENST00000636964 AGR3Q8TD06 166 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 SH3RF2Q8TEC5 729 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 SGF29Q96ES7 293 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 RANBP9Q96S59 729 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 OMDQ99983 421 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 EMILIN2Q9BXX0 1053 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 PFDN4Q9NQP4 134 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 ASAH2Q9NR71 780 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 RAI2Q9Y5P3 530 aa11.48□□□□□ -0.57
CLN6-217ENST00000636964 MYOFQ9NZM1 2061 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 GRXCR1A8MXD5 290 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 PER2O15055 1255 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SNNO75324 88 aaPredicted RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 ZMPSTE24O75844 475 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 GOT2P00505 430 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 CR2P20023 1033 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CHN2P52757 468 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 RAB10P61026 200 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 GSTM4Q03013 218 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 NAPRTQ6XQN6 538 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CILP2Q8IUL8 1156 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CENPLQ8N0S6 344 aaPredicted RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 BRSK1Q8TDC3 778 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 C7orf26Q96N11 449 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CATSPER2Q96P56 530 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 OLFM1Q99784 485 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 C1QTNF1Q9BXJ1 281 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 THAP1Q9NVV9 213 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 DNAJC16Q9Y2G8 782 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 TRAV19A0A0A6YYK7 116 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CCDC162PA2VCL2 907 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 FAM25EA8MYX2 175 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 G3V2L1 256 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 LEFTY2O00292 366 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 DDX5P17844 614 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 GKP32189 559 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SLC12A2P55011 1212 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 AQP5P55064 265 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 RHOAP61586 193 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CTAG1AP78358 180 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 NTHL1P78549 312 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SLC12A1Q13621 1099 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SUZ12Q15022 739 aaKnown RBP11.47□□□□□ -0.57
CLN6-217ENST00000636964 CCDC153Q494R4 210 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 ALG1LQ6GMV1 187 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 KLC3Q6P597 504 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 ADGRG6Q86SQ4 1221 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 KIAA1958Q8N8K9 716 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 MDGA1Q8NFP4 955 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 SPPL3Q8TCT6 385 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 CCDC106Q9BWC9 280 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 BPIFA1Q9NP55 256 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 PNPOQ9NVS9 261 aa11.47□□□□□ -0.57
CLN6-217ENST00000636964 OBSL1O75147 1896 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms