RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CTBP1Q13363 440 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 HLTFQ14527 1009 aaKnown RBP eCLIP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 MORF4L2Q15014 288 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ELF2Q15723 593 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 SLC36A4Q6YBV0 504 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 UNC5AQ6ZN44 842 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 LINC00523Q86TU6 105 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 GATAD2AQ86YP4 633 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ACVR1CQ8NER5 493 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 OR6P1Q8NGX9 317 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 MRRFQ96E11 262 aaKnown RBP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 GDF3Q9NR23 364 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ANKRD6Q9Y2G4 727 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 PSAT1Q9Y617 370 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ZZEF1O43149 2961 aa8.46□□□□□ -1.05
CDKL5-209ENST00000635828 ZFC3H1O60293 1989 aaKnown RBP8.46□□□□□ -1.05
CDKL5-209ENST00000635828 GLYATL1P3A0A0U1RQE8 302 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 OR2AG2A6NM03 316 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CXorf49A8MYA2 514 aaPredicted RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CD38P28907 300 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 NBL1P41271 181 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 PFN3P60673 137 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 SETMARQ53H47 684 aaPredicted RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CCHCR1Q8TD31 782 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 SGF29Q96ES7 293 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 GTPBP2Q9BX10 602 aaKnown RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ASB8Q9H765 288 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 HAUS2Q9NVX0 235 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 NLE1Q9NVX2 485 aaPredicted RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 MOSPD1Q9UJG1 213 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ASXL3Q9C0F0 2248 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 C2orf81A6NN90 581 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ERI2A8K979 691 aaKnown RBP8.46□□□□□ -1.06
CDKL5-209ENST00000635828 FAM155BO75949 473 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CCR5P51681 352 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 CTSCP53634 463 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 GRIK2Q13002 908 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 FZD2Q14332 565 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 STAT4Q14765 748 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 SHBQ15464 509 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ZRANB3Q5FWF4 1079 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ENPP7Q6UWV6 458 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 MCUQ8NE86 351 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ATXN7L3BQ96GX2 97 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 APOOQ9BUR5 198 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 WHRNQ9P202 907 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 ATXN10Q9UBB4 475 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 GALPQ9UBC7 116 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 GMEB2Q9UKD1 530 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 PKP3Q9Y446 797 aa8.46□□□□□ -1.06
CDKL5-209ENST00000635828 SDR42E2A6NKP2 422 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 FOXO6A8MYZ6 492 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 PRAMEF26H0Y7S4 382 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 ZNF30P17039 623 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 ADRA1DP25100 572 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 TRIM23P36406 574 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 MPP1Q00013 466 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CALCOCO2Q13137 446 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 EIF2B5Q13144 721 aaKnown RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 NFATC2Q13469 925 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 KYNUQ16719 465 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 HSP90AA5PQ58FG0 334 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 PCID2Q5JVF3 399 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 SYDE1Q6ZW31 735 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 ABI3BPQ7Z7G0 1075 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 SYT12Q8IV01 421 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 ZNF547Q8IVP9 402 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 OR1E3Q8WZA6 343 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 KIFC1Q9BW19 673 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 IL22Q9GZX6 179 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 OR2AG1Q9H205 316 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 BFARQ9NZS9 450 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 GULP1Q9UBP9 304 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 SLC23A2Q9UGH3 650 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 PRAMEF33A0A0G2JMD5 474 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 SLC25A14O95258 325 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 EML2O95834 649 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CEACAM5P06731 702 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 ZNF8P17098 575 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 AK4P27144 223 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 PTPN5P54829 565 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CRYMQ14894 314 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 NEK5Q6P3R8 708 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CRTC3Q6UUV7 619 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 TMEM135Q86UB9 458 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CAMK1GQ96NX5 476 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 RAB17Q9H0T7 212 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 TSR3Q9UJK0 312 aaKnown RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CRYL1Q9Y2S2 319 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 CNOT1A5YKK6 2376 aaKnown RBP8.45□□□□□ -1.06
CDKL5-209ENST00000635828 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
CDKL5-209ENST00000635828 TLR4O00206 839 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms