RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IL12RB2Q99665 862 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 CPNE1Q99829 537 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 CHRAC1Q9NRG0 131 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 EMCNQ9ULC0 261 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 GNAZP19086 355 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 HTR1BP28222 390 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 OCRLQ01968 901 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 NEPROQ6NW34 567 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 DET1Q7L5Y6 550 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 APPL1Q9UKG1 709 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 MYLKQ15746 1914 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 PEX11AO75192 247 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 LMNAP02545 664 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 HOXC13P31276 330 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SATB1Q01826 763 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 TMEM31Q5JXX7 168 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 KBTBD6Q86V97 674 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 ACE2Q9BYF1 805 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 SLC39A10Q9ULF5 831 aa12.41□□□□□ -0.42
SYNGAP1-207ENST00000628646 OTOL1A6NHN0 477 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 PDZK1P1A8MUH7 402 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ERVK-10P10266 1014 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CTSEP14091 401 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 GRK2P25098 689 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 MC4RP32245 332 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 RGRP47804 291 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 TRAF2Q12933 501 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 BMPR2Q13873 1038 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZCCHC2Q9C0B9 1178 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 NOL6Q9H6R4 1146 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 SAR1AQ9NR31 198 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 VPS9D1Q9Y2B5 631 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CRYL1Q9Y2S2 319 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 SCAMP1O15126 338 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CLDN7O95471 211 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 S100BP04271 92 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ABCG1P45844 678 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 RPL6Q02878 288 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 Q6ZS52 159 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 MYLK4Q86YV6 388 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 RIN3Q8TB24 985 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 LRIG1Q96JA1 1093 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 TBATAQ96M53 351 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ZNF641Q96N77 438 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 FBXO6Q9NRD1 293 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CATSPERZQ9NTU4 200 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 WNT16Q9UBV4 365 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 DNAJC16Q9Y2G8 782 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 SLC27A6Q9Y2P4 619 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CACNB4O00305 520 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 GYG2O15488 501 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 PAK4O96013 591 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CSTF1Q05048 431 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 LPAL2Q16609 132 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 STRA8Q7Z7C7 330 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ADIPOR2Q86V24 386 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 IMP4Q96G21 291 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 FAM167BQ9BTA0 163 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 FBRSL1Q9HCM7 1045 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 THAP10Q9P2Z0 257 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 HS3ST2Q9Y278 367 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 ARL5AQ9Y689 179 aa12.4□□□□□ -0.42
SYNGAP1-207ENST00000628646 CAPN14A8MX76 684 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 H2AFYO75367 372 aaKnown RBP12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 ALDOAP04075 364 aaKnown RBP12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 CFIP05156 583 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 MPOP05164 745 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 C21orf59P57076 290 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZP2Q05996 745 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 TSNAXIP1Q2TAA8 658 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 FRA10AC1Q70Z53 315 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 LTB4R2Q9NPC1 389 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 PCDH12Q9NPG4 1184 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 IL1RAPL1Q9NZN1 696 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNHIT2Q9UHR6 403 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF711Q9Y462 761 aa12.4□□□□□ -0.43
SYNGAP1-207ENST00000628646 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 GLYATL1P3A0A0U1RQE8 302 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 SOCS5O75159 536 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CRCPO75575 148 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PGLSO95336 258 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 ANP32DO95626 131 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PDHA1P08559 390 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 ZNF7P17097 686 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 BOP1Q14137 746 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 RALGPS1Q5JS13 557 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 PDPK2PQ6A1A2 396 aa12.39□□□□□ -0.43
SYNGAP1-207ENST00000628646 MFSD3Q96ES6 412 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms