RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 CRADDP78560 199 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 PPARDQ03181 441 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 DNAJC21Q5F1R6 531 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 PRAMEF14Q5SWL7 426 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 HIBCHQ6NVY1 386 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 DOK6Q6PKX4 331 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 OR56A4Q8NGH8 313 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 PEX13Q92968 403 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 GLYATL1Q969I3 302 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 CARD6Q9BX69 1037 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 MRM3Q9HC36 420 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 SYBUQ9NX95 663 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 WHRNQ9P202 907 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 MOSPD1Q9UJG1 213 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 SLC30A1Q9Y6M5 507 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 ASCC3Q8N3C0 2202 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 A0A1B0GTQ1 180 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 H7C0S8 307 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 TNFRSF10CO14798 259 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 AVILO75366 819 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 SRP72O76094 671 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 SLC25A14O95258 325 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 RASGRP1O95267 797 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ASMTLO95671 621 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF883P0CG24 379 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 RXRGP48443 463 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 BLKP51451 505 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 SRP54P61011 504 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 HNRNPKP61978 463 aaKnown RBP eCLIP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ARHGAP8P85298 464 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 EIF2B5Q13144 721 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ATP13A5Q4VNC0 1218 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 DUPD1Q68J44 220 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 DGLUCYQ7Z3D6 616 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 HID1Q8IV36 788 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 PDIK1LQ8N165 341 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 GDAP1Q8TB36 358 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF398Q8TD17 642 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 BTN2A2Q8WVV5 523 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 CDKN2AIPNLQ96HQ2 116 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 COX14Q96I36 57 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 VPS35Q96QK1 796 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 LRRC1Q9BTT6 524 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 SLC13A1Q9BZW2 595 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 ASB8Q9H765 288 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 IL21RQ9HBE5 538 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 CHRAC1Q9NRG0 131 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 RXFP3Q9NSD7 469 aa18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 DNAAF2Q9NVR5 837 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 CNOT6Q9ULM6 557 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-216ENST00000626660 FRYLO94915 3013 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 MAGEB16A2A368 324 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 TMEM202A6NGA9 273 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 CCL22O00626 93 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 GAPDHSO14556 408 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 CDX4O14627 284 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 GDF9O60383 454 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A9O60656 530 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 CSF2P04141 144 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 NME1P15531 152 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 JUNDP17535 347 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A6P19224 532 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A1P22309 533 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A4P22310 534 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 PSMA3P25788 255 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 MC4RP32245 332 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A3P35503 534 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A5P35504 534 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 MAGEA3P43357 314 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 PRAMEP78395 509 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 XIAPP98170 497 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UAP1L1Q3KQV9 507 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 GLE1Q53GS7 698 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 ZNF542PQ5EBM4 170 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 ZRANB3Q5FWF4 1079 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 STPG1Q5TH74 334 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 RD3Q7Z3Z2 195 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 SNX20Q7Z614 316 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 TRIM74Q86UV6 250 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 PHACTR4Q8IZ21 702 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 NOA1Q8NC60 698 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 TSACCQ96A04 125 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 ULK4Q96C45 1275 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 KIFC1Q9BW19 673 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A7Q9HAW7 530 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A10Q9HAW8 530 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 UGT1A8Q9HAW9 530 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 FGF22Q9HCT0 170 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 TM7SF3Q9NS93 570 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 VPS18Q9P253 973 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 CRLS1Q9UJA2 301 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 SOX13Q9UN79 622 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 MAD1L1Q9Y6D9 718 aa18.95■□□□□ 0.62
SQSTM1-216ENST00000626660 SPTBN4Q9H254 2564 aa18.94■□□□□ 0.62
SQSTM1-216ENST00000626660 LRP4O75096 1905 aa18.94■□□□□ 0.62
SQSTM1-216ENST00000626660 PRSS38A1L453 326 aa18.94■□□□□ 0.62
SQSTM1-216ENST00000626660 C4orf47A7E2U8 309 aa18.94■□□□□ 0.62
SQSTM1-216ENST00000626660 TNFP01375 233 aa18.94■□□□□ 0.62
SQSTM1-216ENST00000626660 HK3P52790 923 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms