RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 CCDC174Q6PII3 467 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 SH2D5Q6ZV89 423 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 PLEKHM3Q6ZWE6 761 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 ANO5Q75V66 913 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.65□□□□□ -1.99
SCN1A-208ENST00000625916 PLD5Q8N7P1 536 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 AMER3Q8N944 861 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 LSM14AQ8ND56 463 aaKnown RBP2.65□□□□□ -1.99
SCN1A-208ENST00000625916 OR2T6Q8NHC8 308 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 THAP6Q8TBB0 222 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 MOCOSQ96EN8 888 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 GRAMD2BQ96HH9 432 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 SENP5Q96HI0 755 aaPredicted RBP2.65□□□□□ -1.99
SCN1A-208ENST00000625916 NEUROD6Q96NK8 337 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 FAM110AQ9BQ89 295 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 TUBB2BQ9BVA1 445 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 LRMDAQ9H2I8 198 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 PLCB1Q9NQ66 1216 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 TCP11L1Q9NUJ3 509 aa2.65□□□□□ -1.99
SCN1A-208ENST00000625916 A0A1W2PPI3 338 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 PLIN1O60240 522 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 TSPAN3O60637 253 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 FTCDO95954 541 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 CEACAM1P13688 526 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 GATA1P15976 413 aaPredicted RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 GPD2P43304 727 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 FASLGP48023 281 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 MLLT10P55197 1068 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 COG7P83436 770 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 FOXD4Q12950 439 aaPredicted RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 KIR2DS3Q14952 304 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 RNPS1Q15287 305 aaKnown RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 SIGIRRQ6IA17 410 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 TMEM81Q6P7N7 255 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 PIWIL4Q7Z3Z4 852 aaKnown RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 C2CD5Q86YS7 1000 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 ACVR1CQ8NER5 493 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 PPHLN1Q8NEY8 458 aaKnown RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 VPS37AQ8NEZ2 397 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 RHBDF1Q96CC6 855 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF414Q96IQ9 312 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 SLC41A2Q96JW4 573 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 C18orf12Q96KH6 178 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 SYT11Q9BT88 431 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 HEMGNQ9BXL5 484 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 IFIH1Q9BYX4 1025 aaKnown RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 TKTL2Q9H0I9 626 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 C20orf141Q9NUB4 165 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 FAM120CQ9NX05 1096 aaKnown RBP2.64□□□□□ -1.99
SCN1A-208ENST00000625916 FBXL2Q9UKC9 423 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 ACAD8Q9UKU7 415 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 PADI3Q9ULW8 664 aa2.64□□□□□ -1.99
SCN1A-208ENST00000625916 LOC105371045A0A1W2PR82 267 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 SEC14L5O43304 696 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 PDE9AO76083 593 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 TSHBP01222 138 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 GNAZP19086 355 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 NR2F2P24468 414 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 NR2C2P49116 596 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 PAPOLAP51003 745 aaKnown RBP2.63□□□□□ -1.99
SCN1A-208ENST00000625916 TBX4P57082 545 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 RUNX1T1Q06455 604 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 ACVR2BQ13705 512 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 KIAA1644Q3SXP7 199 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 DCST1Q5T197 706 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 TXNDC8Q6A555 127 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 HAPLN4Q86UW8 402 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 BEST3Q8N1M1 668 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 GRHL3Q8TE85 626 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 ABHD8Q96I13 439 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 ZNF300Q96RE9 604 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-208ENST00000625916 PSD2Q9BQI7 771 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 SEBOXQ9HB31 216 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-208ENST00000625916 ZBTB20Q9HC78 741 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-208ENST00000625916 KCNJ14Q9UNX9 436 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 EXOGQ9Y2C4 368 aaKnown RBP2.63□□□□□ -1.99
SCN1A-208ENST00000625916 STK36Q9NRP7 1315 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 SMCHD1A6NHR9 2005 aa2.63□□□□□ -1.99
SCN1A-208ENST00000625916 GOLGA6L10A0A0M3HER8 536 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 HS3ST1O14792 307 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 URODP06132 367 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 PLA2G4BP0C869 781 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 TYMPP19971 482 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 MSH3P20585 1137 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 CHKAP35790 457 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 BMXP51813 675 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 KCNJ10P78508 379 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 MBTD1Q05BQ5 628 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 TDGQ13569 410 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 SLC12A1Q13621 1099 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 TAF5Q15542 800 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 MYLK3Q32MK0 819 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 TUBB8Q3ZCM7 444 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 MAP9Q49MG5 647 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 KRTCAP3Q53RY4 240 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 WDR45BQ5MNZ6 344 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 SYCP2LQ5T4T6 812 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 C18orf63Q68DL7 685 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 SLC22A25Q6T423 547 aa2.62□□□□□ -1.99
SCN1A-208ENST00000625916 PQLC2Q6ZP29 291 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms