RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ZNF232Q9UNY5 417 aa18.39■□□□□ 0.53
PCDHB2-202ENST00000622947 A8MX80 341 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 ZNF195O14628 629 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 APOA4P06727 396 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 CHRNGP07510 517 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 HNF1BP35680 557 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 HMGCLP35914 325 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 TECRLQ5HYJ1 363 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 FAM45BPQ6NSW5 357 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 DPY19L3Q6ZPD9 716 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 KIAA0907Q7Z7F0 614 aaPredicted RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 CLNKQ7Z7G1 428 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 TXNDC5Q8NBS9 432 aaKnown RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 RDH11Q8TC12 318 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 FAM45AQ8TCE6 357 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 CCDC97Q96F63 343 aaPredicted RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 TSNARE1Q96NA8 513 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 AARSD1Q9BTE6 412 aaKnown RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 SPATA16Q9BXB7 569 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 KCNK4Q9NYG8 393 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 GALPQ9UBC7 116 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 COMMD3-BMI1R4GMX3 469 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 H7C0S8 307 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 GAPDHSO14556 408 aaPredicted RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 LTA4HP09960 611 aaKnown RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 ECT2LQ008S8 904 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 LSAMPQ13449 338 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 MYLK3Q32MK0 819 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 LIPMQ5VYY2 423 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 ISG20Q96AZ6 181 aaKnown RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 BIRC8Q96P09 236 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 NR1H4Q96RI1 486 aaPredicted RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 MRPL46Q9H2W6 279 aaKnown RBP18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 NKX2-4Q9H2Z4 354 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 ATP13A3Q9H7F0 1226 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 HACD3Q9P035 362 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 MARK1Q9P0L2 795 aa18.38■□□□□ 0.53
PCDHB2-202ENST00000622947 UBA6A0AVT1 1052 aaPredicted RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 RFXAPO00287 272 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 SOCS5O75159 536 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 CLDN7O95471 211 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 WEE1P30291 646 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 FMO4P31512 558 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 SUOXP51687 545 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 NAGLUP54802 743 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 MESP2Q0VG99 397 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 DHCR24Q15392 516 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 Q6ZVU0 165 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 TSPAN33Q86UF1 283 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 C12orf40Q86WS4 652 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 ZNF781Q8N8C0 355 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 CHST14Q8NCH0 376 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 TSPAN17Q96FV3 270 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 MRPL57Q9BQC6 102 aaKnown RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 APOL5Q9BWW9 433 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 GPR63Q9BZJ6 419 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 INTS10Q9NVR2 710 aaKnown RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 ZNF106Q9H2Y7 1883 aaKnown RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 CXorf51AA0A1B0GTR3 108 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 PAPLNO95428 1278 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 CBX6O95503 412 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 SESN3P58005 492 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 SNRPD1P62314 119 aaKnown RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 FAM83EQ2M2I3 478 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 ELMSAN1Q6PJG2 1045 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 METTL3Q86U44 580 aaKnown RBP18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 CYB5D2Q8WUJ1 264 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 PTERQ96BW5 349 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 DPP7Q9UHL4 492 aa18.37■□□□□ 0.53
PCDHB2-202ENST00000622947 OTOL1A6NHN0 477 aaPredicted RBP18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 CYP17A1P05093 508 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 TUBB3Q13509 450 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 KHDC1Q4VXA5 237 aaKnown RBP18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 ZRANB3Q5FWF4 1079 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 FAM78AQ5JUQ0 283 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 ISCA2Q86U28 154 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 NPAS3Q8IXF0 933 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 LSMEM2Q8N112 164 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 CELF5Q8N6W0 485 aaKnown RBP18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 PPFIBP2Q8ND30 876 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 NRG4Q8WWG1 115 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 ECHDC3Q96DC8 303 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 OTUB2Q96DC9 234 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 ZFYVE19Q96K21 471 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 MRGPRX3Q96LB0 322 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 SLC30A3Q99726 388 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 NMUR2Q9GZQ4 415 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 SAR1AQ9NR31 198 aa18.36■□□□□ 0.53
PCDHB2-202ENST00000622947 C1orf232A0A0U1RR37 186 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 NPIPB15A6NHN6 443 aaPredicted RBP18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 ZBTB14O43829 449 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 ATP6V1G1O75348 118 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 PTPN4P29074 926 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 MAPK8P45983 427 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 RPL26P61254 145 aaKnown RBP18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 SLC34A1Q06495 639 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 EML3Q32P44 896 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 VWA5B1Q5TIE3 1220 aa18.35■□□□□ 0.53
PCDHB2-202ENST00000622947 AGAP9Q5VTM2 703 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms