RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 PLIN3O60664 434 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 VIMP08670 466 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 C1SP09871 688 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SLC35E2BP0CK96 405 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 PRSS56P0CW18 603 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 FOSL2P15408 326 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF7P17097 686 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 DRD1P21728 446 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 FMO4P31512 558 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 MMP12P39900 470 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SLC26A3P40879 764 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 KIR2DL1P43626 348 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SPINT3P49223 89 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CDKN1CP49918 316 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 KPNA2P52292 529 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SEC24CP53992 1094 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ADARP55265 1226 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 DCDC1P59894 354 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SEMG2Q02383 582 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ELP6Q0PNE2 266 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 GRSF1Q12849 480 aaKnown RBP eCLIP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CAMK2GQ13555 558 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SMAD2Q15796 467 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CHRNA6Q15825 494 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 DBN1Q16643 649 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 POM121L1PQ3SYA9 428 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 TMEM196Q5HYL7 178 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 LRRC73Q5JTD7 316 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 PSAPL1Q6NUJ1 521 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF549Q6P9A3 640 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 TBC1D1Q86TI0 1168 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 RAVER1Q8IY67 606 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 PNPLA1Q8N8W4 532 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CCDC63Q8NA47 563 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 GPR26Q8NDV2 337 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ARMC2Q8NEN0 867 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF398Q8TD17 642 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 DTX3LQ8TDB6 740 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 LRRC8CQ8TDW0 803 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 PPM1EQ8WY54 764 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ARRDC3Q96B67 414 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ULK4Q96C45 1275 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF317Q96PQ6 595 aaPredicted RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CCT8L2Q96SF2 557 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 AARSD1Q9BTE6 412 aaKnown RBP6.96□□□□□ -1.3
CBWD3-219ENST00000622817 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 ASB8Q9H765 288 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 POPDC3Q9HBV1 291 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CRLS1Q9UJA2 301 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 EMCNQ9ULC0 261 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 FAM50BQ9Y247 325 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 F5P12259 2224 aa6.96□□□□□ -1.3
CBWD3-219ENST00000622817 CDH23Q9H251 3354 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 H0Y858 1186 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PRMT5O14744 637 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 KLHL2O95198 593 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 TOP3BO95985 862 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 FAM107AO95990 144 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ADH1BP00325 375 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ESR1P03372 595 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PROCP04070 461 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PYGLP06737 847 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ELFN1P0C7U0 828 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 NEFHP12036 1026 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ADRB3P13945 408 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PKMP14618 531 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 TAC1P20366 129 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 CD9P21926 228 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 FDXRP22570 491 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 RPS3P23396 243 aaKnown RBP eCLIP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ACRV1P26436 265 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 NTSR1P30989 418 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PSMD8P48556 350 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 CDKN2DP55273 166 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 SEC13P55735 322 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 IRF9Q00978 393 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 CCDC15Q0P6D6 951 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ITGA9Q13797 1035 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 FAM83EQ2M2I3 478 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 LEXMQ3ZCV2 418 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 AGAP9Q5VTM2 703 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ERN2Q76MJ5 926 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 Q7L0L9 218 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 TRMT11Q7Z4G4 463 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 HSD11B1LQ7Z5J1 315 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 CPLX4Q7Z7G2 160 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 SERPINA9Q86WD7 417 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 MMAAQ8IVH4 418 aaKnown RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 RBFAQ8N0V3 343 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 NXPE1Q8N323 547 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 RAB3IL1Q8TBN0 382 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 BCAS4Q8TDM0 211 aa6.95□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF75CPQ92670 426 aaPredicted RBP6.95□□□□□ -1.3
CBWD3-219ENST00000622817 RAB7BQ96AH8 199 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms