RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ITGALP20701 1170 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ATP6V1B2P21281 511 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CD9P21926 228 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 HSD3B2P26439 372 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 LRPAP1P30533 357 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 SHMT2P34897 504 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ARHGDIBP52566 201 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 GP2P55259 537 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 ROR1Q01973 937 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF45Q02386 682 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CCINQ13939 588 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 STARD3Q14849 445 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF404Q494X3 552 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 LRRC38Q5VT99 294 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 PM20D1Q6GTS8 502 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ZNF677Q86XU0 584 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 MICU2Q8IYU8 434 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TBC1D21Q8IYX1 336 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CPA6Q8N4T0 437 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CPXM1Q96SM3 734 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 BDH2Q9BUT1 245 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 ALOXE3Q9BYJ1 711 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 MMP27Q9H306 513 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 SNX15Q9NRS6 342 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 TRMT13Q9NUP7 481 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 PAK1IP1Q9NWT1 392 aaPredicted RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 B3GNT2Q9NY97 397 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 DIMT1Q9UNQ2 313 aaKnown RBP7.89□□□□□ -1.15
VPS11-209ENST00000622309 VWA7Q9Y334 891 aa7.89□□□□□ -1.15
VPS11-209ENST00000622309 CHADO15335 359 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TRIM13O60858 407 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 HLA-DRAP01903 254 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CHRM5P08912 532 aaPredicted RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TGM2P21980 687 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PRIM2P49643 509 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SLC7A2P52569 658 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 MON1BQ7L1V2 547 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 STRADAQ7RTN6 431 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PLCZ1Q86YW0 608 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 RIOX2Q8IUF8 465 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 GLB1L3Q8NCI6 653 aaPredicted RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 ZFAND1Q8TCF1 268 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 BEX2Q9BXY8 128 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SLIRPQ9GZT3 109 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 RAVER2Q9HCJ3 691 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 CYP26B1Q9NR63 512 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 EHD3Q9NZN3 535 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 EIF3KQ9UBQ5 218 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 FAM8A1Q9UBU6 413 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 MRPS7Q9Y2R9 242 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 RAP2CQ9Y3L5 183 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ZNF175Q9Y473 711 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 FAM159BA6NKW6 160 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 AQP12BA6NM10 295 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 MRASO14807 208 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 LDLRP01130 860 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 JUNP05412 331 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 CYP2A6P11509 494 aaPredicted RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 MSH3P20585 1137 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PSMB9P28065 219 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SOX9P48436 509 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 NRLP54845 237 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 RPP30P78346 268 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 DGCR6Q14129 220 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ZMYND11Q15326 602 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 WSCD2Q2TBF2 565 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PITRM1Q5JRX3 1037 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 RFX6Q8HWS3 928 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ZDHHC17Q8IUH5 632 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SPATA2LQ8IUW3 424 aaPredicted RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 AQP12AQ8IXF9 295 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SLC22A15Q8IZD6 547 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CLEC4FQ8N1N0 589 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 FANK1Q8TC84 345 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 RNF170Q96K19 258 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 APOL4Q9BPW4 351 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SH2D3AQ9BRG2 576 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TMPRSS11EQ9UL52 423 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CCDC154A6NI56 674 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 E5RI56 91 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 F8VP50 259 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 SLCO1B7G3V0H7 640 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 YKT6O15498 198 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TBC1D4O60343 1298 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 ATG13O75143 517 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 CFBP00751 764 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 APRTP07741 180 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 FAM86B2P0C5J1 330 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 IL1R1P14778 569 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 TFEBP19484 476 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 AXLP30530 894 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 PTPN7P35236 360 aa7.88□□□□□ -1.15
VPS11-209ENST00000622309 GARSP41250 739 aaKnown RBP7.88□□□□□ -1.15
VPS11-209ENST00000622309 INCA1Q0VD86 236 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms