RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KIAA1671Q9BY89 1806 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ANAPC1Q9H1A4 1944 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 FXYD1O00168 92 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 CD160O95971 181 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 GFAPP14136 432 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 EEF1DP29692 281 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 FMO4P31512 558 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TTPAP49638 278 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 SCNN1BP51168 640 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 CLCN4P51793 760 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 FOXM1Q08050 763 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 RALGDSQ12967 914 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 BFSP2Q13515 415 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 GRB7Q14451 532 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PABPC1LQ4VXU2 614 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 XKR7Q5GH72 579 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ADGRF1Q5T601 910 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TXNDC11Q6PKC3 985 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 FAM126BQ8IXS8 530 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 AHI1Q8N157 1196 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 FBXO39Q8N4B4 442 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TET1Q8NFU7 2136 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 TRPC4APQ8TEL6 797 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 SEPT8Q92599 483 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 EXT2Q93063 718 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZNF597Q96LX8 424 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZNF512Q96ME7 567 aaPredicted RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 SPON2Q9BUD6 331 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 CFHR5Q9BXR6 569 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZNF696Q9H7X3 374 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
PDPN-212ENST00000621990 ARMC1Q9NVT9 282 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PTGDR2Q9Y5Y4 395 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 COMMD10Q9Y6G5 202 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 PLXNA4Q9HCM2 1894 aa9.38□□□□□ -0.91
PDPN-212ENST00000621990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 A0A1B0GTL3 188 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 ANKRD66B4E2M5 251 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 NDUFS3O75489 264 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 MT-CO1P00395 513 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PYGLP06737 847 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 RHOCP08134 193 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 IDO1P14902 403 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 LBPP18428 481 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 CAPN3P20807 821 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 HOXD10P28358 340 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 CORO1AP31146 461 aaKnown RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 SLC7A2P52569 658 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ATXN3P54252 364 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 ARF5P84085 180 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ZNF177Q13360 481 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 TSNQ15631 228 aaKnown RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 CTSL3PQ5NE16 218 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SLC30A9Q6PML9 568 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PIANPQ8IYJ0 282 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 TTC30BQ8N4P2 665 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SNX31Q8N9S9 440 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 GOLM1Q8NBJ4 401 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 KCNJ9Q92806 393 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ZUFSPQ96AP4 578 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 RMDN1Q96DB5 314 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 KCNA7Q96RP8 456 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 GPR21Q99679 349 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 TMEM45AQ9NWC5 275 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PCTPQ9UKL6 214 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 RAI2Q9Y5P3 530 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 GPR45Q9Y5Y3 372 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ZNF106Q9H2Y7 1883 aaKnown RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 SMIM31A0A1B0GVY4 71 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 UBA6A0AVT1 1052 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 ENO4A6NNW6 628 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SUPT3HB4E1H0 165 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 TXNDC9O14530 226 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SUPT3HO75486 399 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ESRRBO95718 433 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 MLYCDO95822 493 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 HSD17B1P14061 328 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PKMP14618 531 aaKnown RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 CDKL1Q00532 357 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PTPRNQ16849 979 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 ANKS6Q68DC2 871 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SPATA19Q7Z5L4 167 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 LRRC43Q8N309 656 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 CD200R1Q8TD46 325 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 TRMT2BQ96GJ1 504 aaKnown RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 EXOC2Q96KP1 924 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 VN1R3Q9BXE9 311 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
PDPN-212ENST00000621990 NACA2Q9H009 215 aa9.37□□□□□ -0.91
PDPN-212ENST00000621990 CCDC68Q9H2F9 335 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms