RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 KLHL32Q96NJ5 620 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 MRPL1Q9BYD6 325 aaKnown RBP17.41■□□□□ 0.38
FAM3A-222ENST00000621967 SUCOQ9UBS9 1254 aaKnown RBP17.41■□□□□ 0.38
FAM3A-222ENST00000621967 RAB26Q9ULW5 256 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 VWA7Q9Y334 891 aa17.41■□□□□ 0.38
FAM3A-222ENST00000621967 C15orf38-AP3S2A0A0A6YYH1 394 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 EME2A4GXA9 379 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-222ENST00000621967 C2orf78A6NCI8 922 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 DNAJA2O60884 412 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 CNTN5O94779 1100 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 IMPDH1P20839 514 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 ATP5C1P36542 298 aaKnown RBP17.4■□□□□ 0.38
FAM3A-222ENST00000621967 GRIA2P42262 883 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 CLCN2P51788 898 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 PSME3P61289 254 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 STX5Q13190 355 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 LRP8Q14114 963 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 TEAD2Q15562 447 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 PRSS36Q5K4E3 855 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 CWF19L1Q69YN2 538 aaKnown RBP17.4■□□□□ 0.38
FAM3A-222ENST00000621967 TXNDC8Q6A555 127 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 ARPINQ7Z6K5 226 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 RNF135Q8IUD6 432 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 SPNS2Q8IVW8 549 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 ARRDC2Q8TBH0 407 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 NCSTNQ92542 709 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 RIPOR3Q96MK2 946 aa17.4■□□□□ 0.38
FAM3A-222ENST00000621967 BRWD1Q9NSI6 2320 aa17.39■□□□□ 0.38
FAM3A-222ENST00000621967 LOC285095A0A1B0GVY8 99 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 UBDO15205 165 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 TBX18O95935 607 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 CKMP06732 381 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ATXN1LP0C7T5 689 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 PABPC4LP0CB38 370 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 DDX6P26196 483 aaKnown RBP eCLIP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ARSDP51689 593 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 CDKN2DP55273 166 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 NFKB2Q00653 900 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ACVR1Q04771 509 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ILF2Q12905 390 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 SIRPB2Q5JXA9 342 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 GPR158Q5T848 1215 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 PTAR1Q7Z6K3 402 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 MIB1Q86YT6 1006 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 RNF148Q8N7C7 305 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 MSLNLQ96KJ4 702 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 COPS7BQ9H9Q2 264 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 SP110Q9HB58 689 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 MRPL40Q9NQ50 206 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 CACNA2D2Q9NY47 1150 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 MARCH2Q9P0N8 246 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 DNMT3LQ9UJW3 386 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ANAPC1Q9H1A4 1944 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 TRAV19A0A0A6YYK7 116 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FBP2O00757 339 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 TXNDC9O14530 226 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 COCHO43405 550 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 LDB2O43679 373 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FSHRP23945 695 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ITKQ08881 620 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FASTKQ14296 549 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 CNPY1Q3B7I2 92 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FAM45BPQ6NSW5 357 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 CYHR1Q6ZMK1 362 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 RPS27LQ71UM5 84 aaKnown RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ISCA2Q86U28 154 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 PGBD5Q8N414 524 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 TMEM102Q8N9M5 508 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FAM45AQ8TCE6 357 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 PEX13Q92968 403 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 S1PR5Q9H228 398 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 Q9H521 79 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-222ENST00000621967 FIS1Q9Y3D6 152 aa17.39■□□□□ 0.37
FAM3A-222ENST00000621967 H3BQ06 376 aaPredicted RBP17.38■□□□□ 0.37
FAM3A-222ENST00000621967 PSMD12O00232 456 aaPredicted RBP17.38■□□□□ 0.37
FAM3A-222ENST00000621967 UBFD1O14562 309 aaKnown RBP17.38■□□□□ 0.37
FAM3A-222ENST00000621967 TRIM24O15164 1050 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 C8BP07358 591 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 SMIM18P0DKX4 95 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 CEBPBP17676 345 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 HDCP19113 662 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 ATP4BP51164 291 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 PLK1P53350 603 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 IL10RBQ08334 325 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 TRIM25Q14258 630 aaKnown RBP17.38■□□□□ 0.37
FAM3A-222ENST00000621967 ZNF678Q5SXM1 525 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 REP15Q6BDI9 236 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 GET4Q7L5D6 327 aaPredicted RBP17.38■□□□□ 0.37
FAM3A-222ENST00000621967 ATP6V0D2Q8N8Y2 350 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 ITFG1Q8TB96 612 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 BTN2A3PQ96KV6 586 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 PKP2Q99959 881 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 EPB41L1Q9H4G0 881 aa17.38■□□□□ 0.37
FAM3A-222ENST00000621967 UBE2ZQ9H832 354 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms