RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 RGS5O15539 181 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 DYRK3O43781 588 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 MTX2O75431 263 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 BEST1O76090 585 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CYP2A7P20853 494 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 NOS3P29474 1203 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 DSC2Q02487 901 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CDK18Q07002 472 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 STX5Q13190 355 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 FGD3Q5JSP0 725 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CWF19L1Q69YN2 538 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 GALNT15Q8N3T1 639 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 LRRC52Q8N7C0 313 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 PTGR2Q8N8N7 351 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 HMGB4Q8WW32 186 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 PPP1R2P1Q96PQ5 205 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CDK5RAP1Q96SZ6 601 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 GATA5Q9BWX5 397 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 POMKQ9H5K3 350 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 RRN3Q9NYV6 651 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 FBXO5Q9UKT4 447 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 NRP1O14786 923 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 LRIG2O94898 1065 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 PTPN3P26045 913 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CHRNA4P43681 627 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 LIMK2P53671 638 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 TMEM198Q66K66 360 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 PRR23BQ6ZRT6 265 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 RNF44Q7L0R7 432 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF438Q7Z4V0 828 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 REM2Q8IYK8 340 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 KCT2Q8NC54 265 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ACTRT2Q8TDY3 377 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 KBTBD7Q8WVZ9 684 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CENPIQ92674 756 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CNGB3Q9NQW8 809 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 DNAJC25-GNG10A0A024R161 153 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 RASGRP1O95267 797 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 HTR1BP28222 390 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 GRIA4P48058 902 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 GPR15P49685 360 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CLK1P49759 484 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 MINDY4Q4G0A6 757 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 PDSS2Q86YH6 399 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF786Q8N393 782 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ACVR1CQ8NER5 493 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CNBD2Q96M20 576 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 C16orf70Q9BSU1 422 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 ACE2Q9BYF1 805 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 AGO3Q9H9G7 860 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 EFCAB1Q9HAE3 211 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 CLIC5Q9NZA1 410 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 RGS17Q9UGC6 210 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 TRHDEQ9UKU6 1024 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 INVSQ9Y283 1065 aa8.25□□□□□ -1.09
PTPDC1-204ENST00000620992 A0A0G2JN53 185 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 TRPC5OSA6NMA1 111 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 C1QTNF3-AMACRE9PGA6 284 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF189O75820 626 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CFIP05156 583 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 UQCRBP14927 111 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CD1EP15812 388 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CDK7P50613 346 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 GPM6BQ13491 265 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 NAB1Q13506 487 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 AMZ1Q400G9 498 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 STXBP5Q5T5C0 1151 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CHST15Q7LFX5 561 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 RASAL3Q86YV0 1011 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 TBATAQ96M53 351 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 COPS8Q99627 209 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PTPN18Q99952 460 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 KRT84Q9NSB2 600 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 SLC9A8Q9Y2E8 581 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 HSPA1AP0DMV8 641 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 HSPA1BP0DMV9 641 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 LAG3P18627 525 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 EPORP19235 508 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PIK3R1P27986 724 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 GUCA1AP43080 201 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 NPY2RP49146 381 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 DGKEP52429 567 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 OCA2Q04671 838 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CHRNB3Q05901 458 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF460Q14592 562 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 GRM3Q14832 879 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PDK3Q15120 406 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PCBP1Q15365 356 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 UAP1L1Q3KQV9 507 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 LIN52Q52LA3 116 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 C16orf87Q6PH81 154 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 HJURPQ8NCD3 748 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CASP10Q92851 521 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 RCN3Q96D15 328 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 NMD3Q96D46 503 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms