RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 SPATC1Q76KD6 591 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PAGE2Q7Z2X7 111 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 HDDC2Q7Z4H3 204 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 DHFR2Q86XF0 187 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TBC1D21Q8IYX1 336 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 HDAC2Q92769 488 aaKnown RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 TMEM143Q96AN5 459 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 NPAS2Q99743 824 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 ALOXE3Q9BYJ1 711 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 NAALAD2Q9Y3Q0 740 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 AGAP5A6NIR3 686 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 C19orf81C9J6K1 198 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 ADM5C9JUS6 153 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 K7ERI5 159 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 EI24O14681 340 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 CAPN5O15484 640 aaPredicted RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 SNX4O95219 450 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 ASS1P00966 412 aaKnown RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 SLC4A1P02730 911 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 AMHP03971 560 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 HMGN1P05114 100 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PRKCGP05129 697 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 HTR1AP08908 422 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 GP5P40197 560 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 MGAT3Q09327 533 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 BAMBIQ13145 260 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 GPR50Q13585 617 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 NOMO1Q15155 1222 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 DPY19L1Q2PZI1 675 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TBRG1Q3YBR2 411 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TBCELQ5QJ74 424 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 SLFN12LQ6IEE8 588 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 TRMT10BQ6PF06 316 aaKnown RBP10.33□□□□□ -0.76
VPS11-207ENST00000620429 ARSKQ6UWY0 536 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 UROC1Q96N76 676 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 RSAD1Q9HA92 442 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PLAC1Q9HBJ0 212 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PDLIM7Q9NR12 457 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 DTLQ9NZJ0 730 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PAK5Q9P286 719 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 FBXO40Q9UH90 709 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 OAZ3Q9UMX2 235 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 STYXL1Q9Y6J8 313 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 CSNK1G3Q9Y6M4 447 aa10.33□□□□□ -0.76
VPS11-207ENST00000620429 PHIPQ8WWQ0 1821 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 WDR81Q562E7 1941 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 FAM159BA6NKW6 160 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 AQP12BA6NM10 295 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 ZNF487B1APH4 448 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 CHRNA1P02708 482 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SLC10A3P09131 477 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 ERP29P30040 261 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 MAPK12P53778 367 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 CDH6P55285 790 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 ZNF45Q02386 682 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 MFSD10Q14728 455 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 RBM20Q5T481 1227 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 ABHD15Q6UXT9 468 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 PLEKHM3Q6ZWE6 761 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 MOB2Q70IA6 237 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 R3HCC1LQ7Z5L2 792 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 AQP12AQ8IXF9 295 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 FAM83FQ8NEG4 500 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 NXPE3Q969Y0 559 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 MCRS1Q96EZ8 462 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 DGCR6LQ9BY27 220 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 MMP27Q9H306 513 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 NTN4Q9HB63 628 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 GBA2Q9HCG7 927 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 NGRNQ9NPE2 291 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 ZC4H2Q9NQZ6 224 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 IARS2Q9NSE4 1012 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 OSGIN1Q9UJX0 560 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 RIMKLBQ9ULI2 386 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 USP18Q9UMW8 372 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 KRT87PA6NCN2 255 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SLC15A5A6NIM6 579 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SPATA31C2B4DYI2 1134 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 H0Y858 1186 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 NCAM2O15394 837 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 RNGTTO60942 597 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 HSPA4LO95757 839 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 PCMT1P22061 227 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 ACVR2AP27037 513 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 CDH5P33151 784 aaPredicted RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 GNPDA1P46926 289 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SOX9P48436 509 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 YWHAEP62258 255 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 CCNA1P78396 465 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 SAMD4BQ5PRF9 694 aaKnown RBP10.32□□□□□ -0.76
VPS11-207ENST00000620429 C6orf132Q5T0Z8 1188 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 PM20D1Q6GTS8 502 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 TMEM65Q6PI78 240 aa10.32□□□□□ -0.76
VPS11-207ENST00000620429 DBX2Q6ZNG2 339 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms