RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	HOXC11	O43248	304 aa	Predicted RBP	13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	DIAPH2	O60879	1101 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	EPHX1	P07099	455 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	FDXR	P22570	491 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SPAM1	P38567	509 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CSNK1D	P48730	415 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	NFATC2	Q13469	925 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GRIN2C	Q14957	1233 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TYSND1	Q2T9J0	566 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CTSL3P	Q5NE16	218 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZNF648	Q5T619	568 aa	Predicted RBP	13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZYG11A	Q6WRX3	759 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ETFBKMT	Q8IXQ9	262 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SPATA16	Q9BXB7	569 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CLPB	Q9H078	707 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	OXSM	Q9NWU1	459 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PRSS21	Q9Y6M0	314 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	NUMBL	Q9Y6R0	609 aa		13.18	□□□□□ -0.3
CYFIP2-222	ENST00000620254	LRRC14B	A6NHZ5	514 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PFDN6	O15212	129 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ETV3	P41162	512 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PTS	Q03393	145 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CCDC85B	Q15834	202 aa	Predicted RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GAB4	Q2WGN9	574 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TMEM151A	Q8N4L1	468 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ESAM	Q96AP7	390 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	BIRC8	Q96P09	236 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	NPEPPSL1	A6NEC2	478 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SOBP	A7XYQ1	873 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	VPS26A	O75436	327 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZNF37A	P17032	561 aa	Predicted RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PSMC3	P17980	439 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	AKT1	P31749	480 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZNF234	Q14588	700 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TSNAXIP1	Q2TAA8	658 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ATP13A5	Q4VNC0	1218 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	MMAA	Q8IVH4	418 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	C10orf67	Q8IYJ2	551 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	KIF2B	Q8N4N8	673 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	MRPL57	Q9BQC6	102 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	INTS10	Q9NVR2	710 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	NCKIPSD	Q9NZQ3	722 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GOLGA8Q	A0A0J9YX86	632 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GOLGA8O	A6NCC3	632 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TMEM233	B4DJY2	109 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GOLGA8N	F8WBI6	632 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254		H0YHG0	523 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	UBXN8	O00124	270 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CDC7	O00311	574 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	BTN3A1	O00481	513 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GAPDHS	O14556	408 aa	Predicted RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SNN	O75324	88 aa	Predicted RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	LAMP2	P13473	410 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TARS	P26639	723 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ALDH18A1	P54886	795 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TSN	Q15631	228 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	AARS2	Q5JTZ9	985 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SPATS2	Q86XZ4	545 aa	Known RBP	13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PLCD3	Q8N3E9	789 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CPA6	Q8N4T0	437 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TERB1	Q8NA31	727 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	KCNK13	Q9HB14	408 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ZFP69B	Q9UJL9	534 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	MED16	Q9Y2X0	877 aa		13.17	□□□□□ -0.3
CYFIP2-222	ENST00000620254	C16orf96	A6NNT2	1141 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SUPT3H	B4E1H0	165 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SUPT3H	O75486	399 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CBX6	O95503	412 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	C1S	P09871	688 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	GFAP	P14136	432 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CDH13	P55290	713 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SKIV2L	Q15477	1246 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ARL13A	Q5H913	290 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TECRL	Q5HYJ1	363 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	LIPM	Q5VYY2	423 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	HSD11B1L	Q7Z5J1	315 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	LKAAEAR1	Q8TD35	194 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SKA2	Q8WVK7	121 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	LINGO1	Q96FE5	620 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	C7orf26	Q96N11	449 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TUBGCP5	Q96RT8	1024 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SORT1	Q99523	831 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	IKZF3	Q9UKT9	509 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	RIMKLB	Q9ULI2	386 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PRMT5	O14744	637 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	KLF11	O14901	512 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	SIX3	O95343	332 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	POU2F2	P09086	479 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	KPNA2	P52292	529 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	RPL26	P61254	145 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	ADAM15	Q13444	863 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	OR4D1	Q15615	310 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PFKFB4	Q16877	469 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	TRIM67	Q6ZTA4	783 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	PARS2	Q7L3T8	475 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	WDR75	Q8IWA0	830 aa	Known RBP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	CHPF	Q8IZ52	775 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	EEF1AKMT1	Q8WVE0	214 aa		13.16	□□□□□ -0.3
CYFIP2-222	ENST00000620254	RPL26L1	Q9UNX3	145 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms