RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ATP5HO75947 161 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 CHRNGP07510 517 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 BPIP17213 487 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 CDKN3Q16667 212 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 GRAMD4Q6IC98 578 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 TPRG1Q6ZUI0 275 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 NSL1Q96IY1 281 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 UBXN10Q96LJ8 280 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 PPP1R36Q96LQ0 422 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 MRPL57Q9BQC6 102 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 FAM83CQ9BQN1 747 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 GATA5Q9BWX5 397 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 WWP1Q9H0M0 922 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 ASB8Q9H765 288 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 BRD9Q9H8M2 597 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 IL26Q9NPH9 171 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 HPS4Q9NQG7 708 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 ELOVL2Q9NXB9 296 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 GLYATL1P3A0A0U1RQE8 302 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 WASH3PC4AMC7 463 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 HSPA4LO95757 839 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 CHRM1P11229 460 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 TFEBP19484 476 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 LHCGRP22888 699 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 LIPMQ5VYY2 423 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 KDM1BQ8NB78 822 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 OR6Y1Q8NGX8 325 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 EXT2Q93063 718 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 MYADMQ96S97 322 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 CYP4F12Q9HCS2 524 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 WASF2Q9Y6W5 498 aa12.63□□□□□ -0.39
TNFAIP3-209ENST00000619035 NEMP2A6NFY4 417 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 TARM1B6A8C7 271 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 DLX3O60479 287 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 NIPSNAP2O75323 286 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 CTSLP07711 333 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZNF37AP17032 561 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UGT1A6P19224 532 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ITGALP20701 1170 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UGT1A1P22309 533 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UGT1A4P22310 534 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 PTPN4P29074 926 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UGT1A3P35503 534 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UGT1A5P35504 534 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 SPAM1P38567 509 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 MNAT1P51948 309 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 NAGLUP54802 743 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 FCHO2Q0JRZ9 810 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 NFATC2Q13469 925 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 TUBB3Q13509 450 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 GAB4Q2WGN9 574 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 TECRLQ5HYJ1 363 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 FAM219BQ5XKK7 198 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 WDR75Q8IWA0 830 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 CCNYL1Q8N7R7 359 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ERLEC1Q96DZ1 483 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 GPR21Q99679 349 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 PLA2G2FQ9BZM2 168 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 SARS2Q9NP81 518 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 APPL1Q9UKG1 709 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 PPIL1Q9Y3C6 166 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 L3MBTL1Q9Y468 752 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 PRR5-ARHGAP8B1AHC4 643 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 E5RI56 91 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 GAPDHSO14556 408 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZNF195O14628 629 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ZBTB14O43829 449 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ESRRAP11474 423 aaPredicted RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 HLA-EP13747 358 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 PKMP14618 531 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 CHRM3P20309 590 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 MPSTP25325 297 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 CA5AP35218 305 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 IDH3AP50213 366 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ARHGAP8P85298 464 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 EIF4HQ15056 248 aaKnown RBP12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 ACAP2Q15057 778 aa12.62□□□□□ -0.39
TNFAIP3-209ENST00000619035 E2F5Q15329 346 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms