RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 RYBPQ8N488 228 aaPredicted RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 PHF10Q8WUB8 498 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 FER1L6-AS2Q96M78 137 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 SPON2Q9BUD6 331 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 ST7Q9NRC1 585 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 RAD18Q9NS91 495 aa4.53□□□□□ -1.68
SNCA-213ENST00000618500 SUCOQ9UBS9 1254 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 RPL26L1Q9UNX3 145 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
SNCA-213ENST00000618500 KLHL33A6NCF5 533 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 BECN2A8MW95 431 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 INSIG1O15503 277 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 KIAA0754O94854 1291 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PIGNO95427 931 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CAPN1P07384 714 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 HBQ1P09105 142 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 COX6B1P14854 86 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CASP14P31944 242 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 GKP32189 559 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 IL10RBQ08334 325 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 DMPKQ09013 629 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ANKRD40Q6AI12 368 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 XKRXQ6PP77 449 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ABRAXAS1Q6UWZ7 409 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CDH24Q86UP0 819 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 GALNT13Q8IUC8 556 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 SFTPA2Q8IWL1 248 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ARFGAP1Q8N6T3 406 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TMEM35BQ8NCS4 154 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 INPP5DQ92835 1189 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 KAT5Q92993 513 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 NUDCD1Q96RS6 583 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CTRCQ99895 268 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 FOXC2Q99958 501 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CARD9Q9H257 536 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 MMRN2Q9H8L6 949 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 DLL4Q9NR61 685 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 RARRES3Q9UL19 164 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PADI2Q9Y2J8 665 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 KNTC1P50748 2209 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 SPTA1P02549 2419 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 A0A1W2PQ72 361 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ARHGAP10A1A4S6 786 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PIPSLA2A3N6 862 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PRSS44E7EML9 344 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 UBXN7O94888 489 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CPP00450 1065 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PLEKP08567 350 aaPredicted RBP4.52□□□□□ -1.69
SNCA-213ENST00000618500 CES1P23141 567 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PTGIRP43119 386 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ARCN1P48444 511 aaKnown RBP4.52□□□□□ -1.69
SNCA-213ENST00000618500 HCAR3P49019 387 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 DNA2P51530 1060 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TDGF1P3P51864 188 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TUBB4BP68371 445 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 BCL2L1Q07817 233 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TUBB2AQ13885 445 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 SLC14A2Q15849 920 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 PLEKHN1Q494U1 663 aaPredicted RBP4.52□□□□□ -1.69
SNCA-213ENST00000618500 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TRNP1Q6NT89 227 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 FAM198BQ6UWH4 519 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TMEM26Q6ZUK4 368 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 FAM71AQ8IYT1 594 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ZNF295-AS1Q8N0V1 137 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ZBTB2Q8N680 514 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 FDCSPQ8NFU4 85 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 JPH3Q8WXH2 748 aaPredicted RBP4.52□□□□□ -1.69
SNCA-213ENST00000618500 PSKH2Q96QS6 385 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 OR6C1Q96RD1 312 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 TUBB2BQ9BVA1 445 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 SIK2Q9H0K1 926 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ASF1BQ9NVP2 202 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CPNE7Q9UBL6 633 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 APEX2Q9UBZ4 518 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 OR12D3Q9UGF7 316 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 AMACRQ9UHK6 382 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 MKL2Q9ULH7 1088 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 ABCA12Q86UK0 2595 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 MED13Q9UHV7 2174 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 CELSR3Q9NYQ7 3312 aa4.52□□□□□ -1.69
SNCA-213ENST00000618500 BICDL2A1A5D9 508 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ARHGAP42A6NI28 874 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 MATN2O00339 956 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 FANCGO15287 622 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 FZD6O60353 706 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PMPCBO75439 489 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 LRIG2O94898 1065 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 F13A1P00488 732 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ACTR1BP42025 376 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 STC1P52823 247 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ACTR1AP61163 376 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 PTK2Q05397 1052 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 LYPLAL1Q5VWZ2 237 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 ZNF385CQ66K41 422 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 Q6ZPB1 254 aaPredicted RBP4.51□□□□□ -1.69
SNCA-213ENST00000618500 RASGRP3Q8IV61 690 aa4.51□□□□□ -1.69
SNCA-213ENST00000618500 TP53INP2Q8IXH6 220 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms