RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 SNX7Q9UNH6 387 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 HIVEP2P31629 2446 aa6.8□□□□□ -1.32
SCAMP1-206ENST00000618166 ANKRD36A6QL64 1941 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 FAM171A2A8MVW0 826 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 XPO1O14980 1071 aaKnown RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 KIAA0391O15091 583 aaKnown RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 BUB1BO60566 1050 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 LTFP02788 710 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 ANKRD34CP0C6C1 535 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 P4HA1P13674 534 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 MST1P26927 711 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 SPAM1P38567 509 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 GNPDA1P46926 289 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 RGS7P49802 495 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 RRADP55042 308 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 DLG4P78352 724 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 ILF3Q12906 894 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 GPS2Q13227 327 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 MTM1Q13496 603 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 RAPGEF1Q13905 1077 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 IL11RAQ14626 422 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 KCNAB1Q14722 419 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 ME3Q16798 604 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 PPP1R3BQ86XI6 285 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 SIX6OS1Q8N1H7 587 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 RYBPQ8N488 228 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 POU5F2Q8N7G0 328 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 ANKRD52Q8NB46 1076 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 SLC4A11Q8NBS3 891 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 SLC38A9Q8NBW4 561 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 CATSPER1Q8NEC5 780 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 UBA3Q8TBC4 463 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 PPP4R1Q8TF05 950 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 TM9SF4Q92544 642 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 MR1Q95460 341 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 C9orf72Q96LT7 481 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 MAGEB10Q96LZ2 347 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 RPRD1AQ96P16 312 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 TBC1D10AQ9BXI6 508 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 GSDMCQ9BYG8 508 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 TRPS1Q9UHF7 1281 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 TCFL5Q9UL49 500 aa6.79□□□□□ -1.32
SCAMP1-206ENST00000618166 H7C1Q1 480 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 CACNB4O00305 520 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 KRIT1O00522 736 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 EIF3DO15371 548 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 TGFB1I1O43294 461 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 THAP12O43422 761 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SPRY1O43609 319 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ZWINTO95229 277 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ADCY5O95622 1261 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ASS1P00966 412 aaKnown RBP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 OTX2P32243 289 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SOX11P35716 441 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ACTR1BP42025 376 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 FASLGP48023 281 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ACTR1AP61163 376 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 PCOLCEQ15113 449 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SGSM1Q2NKQ1 1148 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SYPL2Q5VXT5 272 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 IZUMO3Q5VZ72 239 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 TMEM151BQ8IW70 566 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 ACRBPQ8NEB7 543 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 OR7D4Q8NG98 312 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 NR4A3Q92570 626 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 CALML4Q96GE6 196 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 BTN2A3PQ96KV6 586 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SERPINB11Q96P15 392 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 TGM7Q96PF1 710 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 C2orf49Q9BVC5 232 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 KIAA1586Q9HCI6 787 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SRA1Q9HD15 236 aaKnown RBP6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 OLFML3Q9NRN5 406 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 AGPAT3Q9NRZ7 376 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 C1GALT1Q9NS00 363 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 LRFN1Q9P244 771 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 VANGL2Q9ULK5 521 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 SUFUQ9UMX1 484 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 TBC1D30Q9Y2I9 924 aa6.78□□□□□ -1.32
SCAMP1-206ENST00000618166 NKX2-6A6NCS4 301 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 TRIM49BA6NDI0 452 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 KCNU1A8MYU2 1149 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 TNFRSF10CO14798 259 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 PHF1O43189 567 aaPredicted RBP6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 TEX33O43247 280 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 ZNHIT1O43257 154 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 SLC19A2O60779 497 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 CUTAO60888 179 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 ALOX12BO75342 701 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 CD160O95971 181 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 APOEP02649 317 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 CEACAM5P06731 702 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 RHOCP08134 193 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 FOLR1P15328 257 aa6.77□□□□□ -1.33
SCAMP1-206ENST00000618166 GAP43P17677 238 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms