RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GIMAP7Q8NHV1 300 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 RHEBL1Q8TAI7 183 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ITFG1Q8TB96 612 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 NAT14Q8WUY8 206 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 L3HYPDHQ96EM0 354 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 CD248Q9HCU0 757 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZDHHC7Q9NXF8 308 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 TRMT6Q9UJA5 497 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
PCDHGC3-205ENST00000617641 CXorf51AA0A1B0GTR3 108 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 LRRC14BA6NHZ5 514 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 SUPT7LO94864 414 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 HERVK_113P63132 956 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 TSNQ15631 228 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 UNC50Q53HI1 259 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 METTL21CQ5VZV1 264 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 Q6ZVU0 165 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 ACAD11Q709F0 780 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 ADIPOR2Q86V24 386 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 TMPRSS6Q8IU80 811 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 C12orf76Q8N812 135 aaPredicted RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 KIAA1191Q96A73 305 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 ERVK-6Q9BXR3 956 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 P2RY12Q9H244 342 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 EML4Q9HC35 981 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 SARS2Q9NP81 518 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 IL26Q9NPH9 171 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 G3BP2Q9UN86 482 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 MRPS23Q9Y3D9 190 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-205ENST00000617641 NPEPPSL1A6NEC2 478 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CDC7O00311 574 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 UBFD1O14562 309 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SNUPNO95149 360 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SIX3O95343 332 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ESR1P03372 595 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 BPIP17213 487 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CHRM3P20309 590 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 MXRA7P84157 204 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 PFKFB4Q16877 469 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CARD16Q5EG05 197 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 TMEM215Q68D42 235 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 NXNQ6DKJ4 435 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ELMSAN1Q6PJG2 1045 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SERPINA9Q86WD7 417 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 PCDH20Q8N6Y1 951 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CHST14Q8NCH0 376 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CD200R1Q8TD46 325 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 AGAP11Q8TF27 550 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 LRRC3BQ96PB8 259 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SUV39H2Q9H5I1 410 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 RNF112Q9ULX5 631 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SOBPA7XYQ1 873 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SUPT3HB4E1H0 165 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 E5RI56 91 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 KERAO60938 352 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 SUPT3HO75486 399 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 TSPAN12O95859 305 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT2B4P06133 528 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 GM2AP17900 193 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ADARP55265 1226 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 KLF10Q13118 480 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 GPM6BQ13491 265 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 TMEM198Q66K66 360 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CRTC1Q6UUV9 634 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 EEF1AKMT1Q8WVE0 214 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 KCNJ9Q92806 393 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ECHDC3Q96DC8 303 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 DENND2DQ9H6A0 471 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ASB8Q9H765 288 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 CERS4Q9HA82 394 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
PCDHGC3-205ENST00000617641 ZNF197O14709 1029 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 GFAPP14136 432 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT1A6P19224 532 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT1A1P22309 533 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT1A4P22310 534 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 WEE1P30291 646 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT1A3P35503 534 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 UGT1A5P35504 534 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 PGM1P36871 562 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CDH13P55290 713 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 ATP6V0D1P61421 351 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 NFATC2Q13469 925 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CPNE9Q8IYJ1 553 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 NKAPQ8N5F7 415 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 STAG3L4Q8TBR4 150 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 GRIN3AQ8TCU5 1115 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 SORCS1Q8WY21 1168 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 LINGO1Q96FE5 620 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 BOCQ9BWV1 1114 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 CEP44Q9C0F1 390 aa17.21■□□□□ 0.35
PCDHGC3-205ENST00000617641 PLA2G4CQ9UP65 541 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms