RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SCAMP4Q969E2 229 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 CLDN23Q96B33 292 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 ATXN7L3BQ96GX2 97 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 TCF12Q99081 682 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 KLF6Q99612 283 aaPredicted RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 CDH19Q9H159 772 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 C2orf42Q9NWW7 574 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 COQ6Q9Y2Z9 468 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 LZTS3O60299 673 aaPredicted RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 CD151P48509 253 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 LIMK2P53671 638 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 DCDC1P59894 354 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 SLC18A2Q05940 514 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 NFATC2Q13469 925 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 CNSTQ6PJW8 725 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 GALNT7Q86SF2 657 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 PGBD3Q8N328 593 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 OR14C36Q8NHC7 312 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 ABCG8Q9H221 673 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 RHOJQ9H4E5 214 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 FZD4Q9ULV1 537 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 MTO1Q9Y2Z2 717 aaKnown RBP13.69□□□□□ -0.22
TMEM254-213ENST00000613758 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
TMEM254-213ENST00000613758 GMNCA6NCL1 334 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 GOLGA8RI6L899 631 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 GPR39O43194 453 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 PLRG1O43660 514 aaKnown RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 NDUFS3O75489 264 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 RFPL1O75677 317 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 MT-ND3P03897 115 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 RPA3P35244 121 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 GPR33Q49SQ1 333 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CYP2U1Q7Z449 544 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 FAM124AQ86V42 546 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 MTBPQ96DY7 904 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 VPS39Q96JC1 886 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 SPATA16Q9BXB7 569 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CHRDQ9H2X0 955 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 INTS10Q9NVR2 710 aaKnown RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 NFKBIL1Q9UBC1 381 aaPredicted RBP13.68□□□□□ -0.22
TMEM254-213ENST00000613758 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 PFDN6O15212 129 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 ASMTLO95671 621 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CA5AP35218 305 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 TTPAP49638 278 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CREB5Q02930 508 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 DMTNQ08495 405 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CERS6Q6ZMG9 384 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 SPEM1Q8N4L4 309 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 TSTD1Q8NFU3 115 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 DTX3LQ8TDB6 740 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CKAP2Q8WWK9 683 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 AP2M1Q96CW1 435 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 ITM2CQ9NQX7 267 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 EBF1Q9UH73 591 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CRLS1Q9UJA2 301 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 CRYL1Q9Y2S2 319 aa13.68□□□□□ -0.22
TMEM254-213ENST00000613758 COL6A3P12111 3177 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TRBV5-4A0A0C4DH59 114 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 PYGBP11216 843 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 PPARGP37231 505 aaPredicted RBP13.67□□□□□ -0.22
TMEM254-213ENST00000613758 RPS9P46781 194 aaKnown RBP13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TPMTP51580 245 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ADPRHP54922 357 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ITGA9Q13797 1035 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ATP13A5Q4VNC0 1218 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 HENMT1Q5T8I9 393 aaKnown RBP13.67□□□□□ -0.22
TMEM254-213ENST00000613758 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ANO7Q6IWH7 933 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TIFABQ6ZNK6 161 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 SERPINA9Q86WD7 417 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 DCLK2Q8N568 766 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TRAM1L1Q8N609 369 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
TMEM254-213ENST00000613758 NUS1Q96E22 293 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TTC1Q99614 292 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 CD93Q9NPY3 652 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 SCN8AQ9UQD0 1980 aa13.67□□□□□ -0.22
TMEM254-213ENST00000613758 TBC1D3DA0A087WVF3 549 aa13.66□□□□□ -0.22
TMEM254-213ENST00000613758 TBC1D3IA0A087WXS9 549 aa13.66□□□□□ -0.22
TMEM254-213ENST00000613758 TBC1D3EA0A087X179 549 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms