RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TMPRSS9Q7Z410 1059 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 SNRNP27Q8WVK2 155 aaKnown RBP17.22■□□□□ 0.35
PRKN-209ENST00000612485 TRIB3Q96RU7 358 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 SEMA6CQ9H3T2 930 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 RDH14Q9HBH5 336 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 RAD18Q9NS91 495 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 ACSL6Q9UKU0 697 aa17.22■□□□□ 0.35
PRKN-209ENST00000612485 FADS2P1A8MWK0 482 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 PPM1DO15297 605 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 DNAJC6O75061 913 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 ATP1A1P05023 1023 aaKnown RBP17.21■□□□□ 0.35
PRKN-209ENST00000612485 CDKN2BP42772 138 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 HADHBP55084 474 aaKnown RBP17.21■□□□□ 0.35
PRKN-209ENST00000612485 CDK18Q07002 472 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 PCSK7Q16549 785 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 USP53Q70EK8 1073 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 KDELC2Q7Z4H8 507 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 SRPK1Q96SB4 655 aaKnown RBP17.21■□□□□ 0.35
PRKN-209ENST00000612485 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 NUDT22Q9BRQ3 303 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
PRKN-209ENST00000612485 OAS3Q9Y6K5 1087 aaKnown RBP17.21■□□□□ 0.35
PRKN-209ENST00000612485 A0A0A6YYK5 440 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 K7ENP7 123 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 CST8O60676 142 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 ITIH1P19827 911 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 CD1CP29017 333 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 FASLGP48023 281 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 MAPK10P53779 464 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 DCDC1P59894 354 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 GPLD1P80108 840 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 TRA2AQ13595 282 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKN-209ENST00000612485 PRKD1Q15139 912 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 TAZQ16635 292 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 TAF1BQ53T94 588 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 ZNF569Q5MCW4 686 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 INO80CQ6PI98 192 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 CCDC81Q6ZN84 652 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 TFB1MQ8WVM0 346 aaKnown RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 TADA1Q96BN2 335 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 WBP1Q96G27 269 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 ZSCAN5AQ9BUG6 496 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 SPATA16Q9BXB7 569 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 GPR63Q9BZJ6 419 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 CARD9Q9H257 536 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 LUC7LQ9NQ29 371 aaKnown RBP17.2■□□□□ 0.34
PRKN-209ENST00000612485 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 KCNK4Q9NYG8 393 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 SHOC2Q9UQ13 582 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 ZNF711Q9Y462 761 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
PRKN-209ENST00000612485 IGHV1OR21-1A0A087WYE8 117 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 AGRPO00253 132 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 MTSS1O43312 755 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 LCA5LO95447 670 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 NDST3O95803 873 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 LIPCP11150 499 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SLC2A4P14672 509 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 PTPN3P26045 913 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 LIMK2P53671 638 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SQSTM1Q13501 440 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 C16orf72Q14CZ0 275 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SPA17Q15506 151 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 TMEM164Q5U3C3 297 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 ALS2CLQ60I27 953 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 KAZNQ674X7 775 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 PDPK2PQ6A1A2 396 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 ZNF574Q6ZN55 896 aaPredicted RBP17.19■□□□□ 0.34
PRKN-209ENST00000612485 B4GALNT4Q76KP1 1039 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 TMC3Q7Z5M5 1100 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SFRP1Q8N474 314 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 TRAM1L1Q8N609 369 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 OR4D9Q8NGE8 314 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SPATA22Q8NHS9 363 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SLC37A2Q8TED4 501 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 USP7Q93009 1102 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 EID2BQ96D98 161 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 CCDC74BQ96LY2 380 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 SLC38A3Q99624 504 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 B3GNT4Q9C0J1 378 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 NFKBIL1Q9UBC1 381 aaPredicted RBP17.19■□□□□ 0.34
PRKN-209ENST00000612485 PRKAB1Q9Y478 270 aa17.19■□□□□ 0.34
PRKN-209ENST00000612485 MGAQ8IWI9 3026 aa17.18■□□□□ 0.34
PRKN-209ENST00000612485 FASNP49327 2511 aaKnown RBP17.18■□□□□ 0.34
PRKN-209ENST00000612485 TRBV23OR9-2A0A075B6M9 112 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms