RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ZNF865P0CJ78 1059 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 MSH3P20585 1137 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 IL5RAQ01344 420 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 AP5B1Q2VPB7 878 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ACBD5Q5T8D3 534 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 GPR107Q5VW38 600 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 GLYATQ6IB77 296 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OR52E8Q6IFG1 317 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 RANBP10Q6VN20 620 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 GCNT7Q6ZNI0 430 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 CENPNQ96H22 339 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 ARL15Q9NXU5 204 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 PTTG2Q9NZH5 202 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 POLR3HQ9Y535 204 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 INSIG1O15503 277 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 TBL1XO60907 577 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 CPSF4O95639 269 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 C1RP00736 705 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 S100A3P33764 101 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 LEPRP48357 1165 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 ARSDP51689 593 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 NAA20P61599 178 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 SMAD3P84022 425 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 BOP1Q14137 746 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 PIGGQ5H8A4 983 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 SPESP1Q6UW49 350 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 ADCK1Q86TW2 530 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 OFCC1Q8IZS5 231 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 SIDT2Q8NBJ9 832 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 IMP4Q96G21 291 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 PPP3R2Q96LZ3 170 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 KCNA7Q96RP8 456 aa8.64□□□□□ -1.03
LIG4-204ENST00000611712 TFB2MQ9H5Q4 396 aaKnown RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 MARCH4Q9P2E8 410 aaPredicted RBP8.64□□□□□ -1.03
LIG4-204ENST00000611712 BCL10O95999 233 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 UROSP10746 265 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 MTHFD1P11586 935 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 CORO1AP31146 461 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 KCNQ1P51787 676 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ECT2LQ008S8 904 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 PFKPQ01813 784 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 HSPA14Q0VDF9 509 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CRY1Q16526 586 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CPSF6Q16630 551 aaKnown RBP eCLIP8.63□□□□□ -1.03
LIG4-204ENST00000611712 ZNF678Q5SXM1 525 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SZRD1Q7Z422 152 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 EID3Q8N140 333 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 VPS37AQ8NEZ2 397 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 NT5C3BQ969T7 300 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 C11orf84Q9BUA3 381 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 ADI1Q9BV57 179 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CCSER2Q9H7U1 834 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SIPA1L1O43166 1804 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 NRXN2Q9P2S2 1712 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CDC7O00311 574 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 NIPSNAP2O75323 286 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 PAPSS2O95340 614 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 JUNP05412 331 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 EPB42P16452 691 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 PPP3CCP48454 512 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ATN1P54259 1190 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 EPHB3P54753 998 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 RPL26P61254 145 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 NRG1Q02297 640 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 OGFRL1Q5TC84 451 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 PGM2L1Q6PCE3 622 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 P3H2Q8IVL5 708 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TERB1Q8NA31 727 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SELENOMQ8WWX9 145 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 LRRC58Q96CX6 371 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TTPALQ9BTX7 342 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 C2orf49Q9BVC5 232 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 MRPL9Q9BYD2 267 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 FNIP2Q9P278 1114 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 GALPQ9UBC7 116 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 MYADML2A6NDP7 307 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SYN3O14994 580 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ECI2O75521 394 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CHRNA1P02708 482 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 GPIP06744 558 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CAPN1P07384 714 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ANXA6P08133 673 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CNPP09543 421 aaKnown RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 MAPK1P28482 360 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TTKP33981 857 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 SERPINB10P48595 397 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 CDH15P55291 814 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
LIG4-204ENST00000611712 ARMC3Q5W041 872 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 KCTD11Q693B1 232 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 TPGS1Q6ZTW0 290 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 ZNF280BQ86YH2 543 aa8.63□□□□□ -1.03
LIG4-204ENST00000611712 FAM9CQ8IZT9 166 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms