RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 KLK6Q92876 244 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 IGSF8Q969P0 613 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 CXorf40BQ96DE9 158 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 DACH2Q96NX9 599 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 TSSK3Q96PN8 268 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 RHBGQ9H310 441 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 INVSQ9Y283 1065 aa7.25□□□□□ -1.25
CSDE1-218ENST00000610726 C2orf78A6NCI8 922 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SLC31A1O15431 190 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 STK16O75716 305 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SMNDC1O75940 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 HTR1BP28222 390 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 GRIA3P42263 894 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CCT8P50990 548 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PRKAG1P54619 331 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 IRX1P78414 480 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NAE1Q13564 534 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SQLEQ14534 574 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SIX1Q15475 284 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TAF1AQ15573 450 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 LY6G5CQ5SRR4 150 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PAQR3Q6TCH7 311 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 MRPL10Q7Z7H8 261 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CFAP206Q8IYR0 622 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ZBTB2Q8N680 514 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CLDN19Q8N6F1 224 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 C12orf76Q8N812 135 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 BADQ92934 168 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TIFAQ96CG3 184 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 REPS1Q96D71 796 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PPP3R2Q96LZ3 170 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 C7orf26Q96N11 449 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 OLFM3Q96PB7 478 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NPAS2Q99743 824 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 KLHL4Q9C0H6 718 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ADAM7Q9H2U9 754 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SUV39H2Q9H5I1 410 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ELAC1Q9H777 363 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 IPPKQ9H8X2 491 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 VPS51Q9UID3 782 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ISM1B1AKI9 464 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ANKRD66B4E2M5 251 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ADAMTS4O75173 837 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TCEA3O75764 348 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 KRT36O76013 467 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 OAZ2O95190 189 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CHRNGP07510 517 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NRIP1P48552 1158 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TGM3Q08188 693 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 KLF10Q13118 480 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 RFTN1Q14699 578 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ACAP2Q15057 778 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ZYG11AQ6WRX3 759 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ATG16L2Q8NAA4 619 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 GDPD5Q8WTR4 605 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 COL26A1Q96A83 441 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TPD52L3Q96J77 140 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PLEKHA8Q96JA3 519 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 BBS4Q96RK4 519 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TCF12Q99081 682 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 OSBPL7Q9BZF2 842 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NOL11Q9H8H0 719 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 COMMD8Q9NX08 183 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SELENONQ9NZV5 590 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 FAM159BA6NKW6 160 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 H0YGN5 161 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TRAFD1O14545 582 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 GABRDO14764 452 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ESR1P03372 595 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PSMC3P17980 439 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 FGFR3P22607 806 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PTGER3P43115 390 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CACNA2D1P54289 1103 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CLCQ05315 142 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ELP6Q0PNE2 266 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 PEX6Q13608 980 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 FAM98BQ52LJ0 330 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 RBM20Q5T481 1227 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 GCNT7Q6ZNI0 430 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 GK5Q6ZS86 529 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 STK32CQ86UX6 486 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 TMEM132CQ8N3T6 1108 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 OR2AP1Q8NGE2 309 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 RP9Q8TA86 221 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 FBXO30Q8TB52 745 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 CLPTM1LQ96KA5 538 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF599Q96NL3 588 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 MMADHCQ9H3L0 296 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 MFSD1Q9H3U5 465 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 RNPEPL1Q9HAU8 725 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 SPATS2LQ9NUQ6 558 aaKnown RBP7.24□□□□□ -1.25
CSDE1-218ENST00000610726 IMPAD1Q9NX62 359 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 FETUBQ9UGM5 382 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 EGFL7Q9UHF1 273 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 BLOC1S6Q9UL45 172 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 ZNF711Q9Y462 761 aa7.24□□□□□ -1.25
CSDE1-218ENST00000610726 NFS1Q9Y697 457 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms