RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PHGDHO43175 533 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 AP1G1O43747 822 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BNIP3LO60238 219 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C1SP09871 688 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TROVE2P10155 538 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MYL2P10916 166 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NEFHP12036 1026 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ALDH3A1P30838 453 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NSG1P42857 185 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ABCG1P45844 678 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DNAJB13P59910 316 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NFKB2Q00653 900 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OCRLQ01968 901 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RALGDSQ12967 914 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SMAD1Q15797 465 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TECRLQ5HYJ1 363 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MACC1Q6ZN28 852 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF771Q7L3S4 317 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 YTHDF3Q7Z739 585 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PLD6Q8N2A8 252 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FSTL5Q8N475 847 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TMEM151AQ8N4L1 468 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCDC63Q8NA47 563 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCDC197Q8NCU1 140 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PIP4K2CQ8TBX8 421 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 STON2Q8WXE9 905 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SEC16BQ96JE7 1060 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SMIM14Q96QK8 99 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FAM129BQ96TA1 746 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DERL2Q9GZP9 239 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CLPBQ9H078 707 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TFB2MQ9H5Q4 396 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ASB8Q9H765 288 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OXSMQ9NWU1 459 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CRLS1Q9UJA2 301 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CDH23Q9H251 3354 aa12.21□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 G3V2L1 256 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MBTPS2O43462 519 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRIM13O60858 407 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 AP2A2O94973 939 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ADH1BP00325 375 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLC4A1P02730 911 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FGF3P11487 239 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DRD1P21728 446 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 BGNP21810 368 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CTHP32929 405 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 IL12RB1P42701 662 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KIR2DL1P43626 348 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CDKN2DP55273 166 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 IRF9Q00978 393 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TIAL1Q01085 375 aaKnown RBP eCLIP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PFKPQ01813 784 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MESP2Q0VG99 397 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CHI3L2Q15782 390 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TMEM52BQ4KMG9 183 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HENMT1Q5T8I9 393 aaKnown RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LIPMQ5VYY2 423 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM151BQ6UXP7 276 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PARS2Q7L3T8 475 aaKnown RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TTC7BQ86TV6 843 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SERPINA9Q86WD7 417 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLC22A9Q8IVM8 553 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRAM1L1Q8N609 369 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KCTD4Q8WVF5 259 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NDNQ99608 321 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GABRG3Q99928 467 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PHF7Q9BWX1 381 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RSPH9Q9H1X1 276 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STN1Q9H668 368 aaKnown RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PRSS16Q9NQE7 514 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RUVBL2Q9Y230 463 aaKnown RBP12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CRYL1Q9Y2S2 319 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MED16Q9Y2X0 877 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ARL2BPQ9Y2Y0 163 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MYO10Q9HD67 2058 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GRXCR2A6NFK2 248 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SPECC1L-ADORA2AF8WAN1 911 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KPNA3O00505 521 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RNASEH1O60930 286 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RHOBTB1O94844 696 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ELFN1P0C7U0 828 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RALBP11234 206 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ADRB3P13945 408 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms