RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 PROSCO94903 275 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 ATP1A1P05023 1023 aaKnown RBP17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 CSTF2P33240 577 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 SPINT3P49223 89 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 EPHB1P54762 984 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 NFKB2Q00653 900 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 BIRC2Q13490 618 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 PDK2Q15119 407 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 QPCTQ16769 361 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 HENMT1Q5T8I9 393 aaKnown RBP17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 IYDQ6PHW0 289 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 PRICKLE2Q7Z3G6 844 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 ARHGAP22Q7Z5H3 698 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 KCTD6Q8NC69 237 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 ZNF564Q8TBZ8 553 aaPredicted RBP17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 EID2BQ96D98 161 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 CBX8Q9HC52 389 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 PCDH9Q9HC56 1237 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 SLC39A1Q9NY26 324 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 TBC1D29Q9UFV1 150 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 ZNHIT2Q9UHR6 403 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 DNPEPQ9ULA0 475 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 SDK2Q58EX2 2172 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 TLN1Q9Y490 2541 aaKnown RBP17.83■□□□□ 0.45
CHMP2A-208ENST00000601220 CYSRT1A8MQ03 144 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 SSR1P43307 286 aaKnown RBP17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 WDR74Q6RFH5 385 aaPredicted RBP17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 LUZP1Q86V48 1076 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 CNTD1Q8N815 330 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 LPCAT1Q8NF37 534 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC38A3Q99624 504 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 FAM117AQ9C073 453 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 SARS2Q9NP81 518 aaKnown RBP17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 GEMIN8Q9NWZ8 242 aaKnown RBP17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 DTLQ9NZJ0 730 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 PILRAQ9UKJ1 303 aa17.83■□□□□ 0.44
CHMP2A-208ENST00000601220 EFCAB7A8K855 629 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ANKRD66B4E2M5 251 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ASMTLO95671 621 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 GYPCP04921 128 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 SFTPCP11686 197 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 LIFP15018 202 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 CSRP3P50461 194 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ATP1A2P50993 1020 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 NFKBIBQ15653 356 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 FAM182AQ5T1J6 154 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ANKS6Q68DC2 871 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 CHST15Q7LFX5 561 aaPredicted RBP17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 HDAC11Q96DB2 347 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 RTP4Q96DX8 246 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ASPSCR1Q9BZE9 553 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 FAM83DQ9H4H8 585 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 IL17BQ9UHF5 180 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 ADGRG1Q9Y653 693 aa17.82■□□□□ 0.44
CHMP2A-208ENST00000601220 C1orf232A0A0U1RR37 186 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 JCHAINP01591 159 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 HNRNPH3P31942 346 aaKnown RBP17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 GJC1P36383 396 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 UBASH3AP57075 661 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 MC2RQ01718 297 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 HHEXQ03014 270 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 DCAF12Q5T6F0 453 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 LYSMD3Q7Z3D4 306 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 CCDC13Q8IYE1 715 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 CACNA2D3Q8IZS8 1091 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 CCDC112Q8NEF3 446 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 OR10G6Q8NH81 332 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 RAPGEF5Q92565 580 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 TRIB3Q96RU7 358 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 PACSIN1Q9BY11 444 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 TRIM4Q9C037 500 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 RMI1Q9H9A7 625 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 KCNK6Q9Y257 313 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 LUC7L2Q9Y383 392 aaKnown RBP17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 HEMK1Q9Y5R4 338 aaPredicted RBP17.81■□□□□ 0.44
CHMP2A-208ENST00000601220 DUX1O43812 170 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 NUAK1O60285 661 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 RAD1O60671 282 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 MX2P20592 715 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 CA4P22748 312 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 KDELR1P24390 212 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 CD86P42081 329 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 RAB15P59190 212 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 IFI35P80217 286 aaPredicted RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 PPIDQ08752 370 aaKnown RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 ZBTB17Q13105 803 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 NFATC2Q13469 925 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 ASTE1Q2TB18 679 aaPredicted RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 TIPARPQ7Z3E1 657 aaKnown RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 FAM129CQ86XR2 697 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 MAP7D3Q8IWC1 876 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 IL22RA1Q8N6P7 574 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 PLD5Q8N7P1 536 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 COL26A1Q96A83 441 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 IQCDQ96DY2 449 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 AHCYL2Q96HN2 611 aaKnown RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 RNF157Q96PX1 679 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms