RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ZFC3H1O60293 1989 aaKnown RBP16.86■□□□□ 0.29
SCAF1-204ENST00000601038 ZNF462Q96JM2 2506 aa16.86■□□□□ 0.29
SCAF1-204ENST00000601038 TRBV23OR9-2A0A075B6M9 112 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 RGSL1A5PLK6 1076 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 STMND1H3BQB6 276 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 JCHAINP01591 159 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 MMP2P08253 660 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 CSF2RBP32927 897 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 CSTF2P33240 577 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 CD86P42081 329 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 QPCTQ16769 361 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 HENMT1Q5T8I9 393 aaKnown RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 CCDC112Q8NEF3 446 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 CCHCR1Q8TD31 782 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 SLC37A2Q8TED4 501 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 ZNF830Q96NB3 372 aaPredicted RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 SLC38A3Q99624 504 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 ADGRE3Q9BY15 652 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 RMI1Q9H9A7 625 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 PKD2L2Q9NZM6 624 aa16.85■□□□□ 0.29
SCAF1-204ENST00000601038 OAS3Q9Y6K5 1087 aaKnown RBP16.85■□□□□ 0.29
SCAF1-204ENST00000601038 FADS2P1A8MWK0 482 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 ZNF487B1APH4 448 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 KCNK1O00180 336 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 EML2O95834 649 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 TPM3P06753 285 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 TMEM253P0C7T8 217 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 MPSTP25325 297 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 ARSDP51689 593 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 IFI35P80217 286 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 IYDQ6PHW0 289 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 CHST15Q7LFX5 561 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 VSIG1Q86XK7 387 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 PLD5Q8N7P1 536 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 CNTD1Q8N815 330 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 OR8K1Q8NGG5 319 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 OR10G6Q8NH81 332 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 EXTL1Q92935 676 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 AHCYL2Q96HN2 611 aaKnown RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 ARHGAP9Q9BRR9 750 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 DDA1Q9BW61 102 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 SARS2Q9NP81 518 aaKnown RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 TMEM9Q9P0T7 183 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 PRKAB1Q9Y478 270 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 PCYT1BQ9Y5K3 369 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-204ENST00000601038 SDK2Q58EX2 2172 aa16.84■□□□□ 0.29
SCAF1-204ENST00000601038 SSU72P8A0A1W2PR75 194 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 WT1P19544 449 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-204ENST00000601038 ATP1A2P50993 1020 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 HHEXQ03014 270 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 MESDQ14696 234 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 WDR74Q6RFH5 385 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-204ENST00000601038 ZNF761Q86XN6 746 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-204ENST00000601038 SLC35G2Q8TBE7 412 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 ART4Q93070 314 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 NKD1Q969G9 470 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 SH3KBP1Q96B97 665 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 DNAJC7Q99615 494 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 HERPUD2Q9BSE4 406 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 ASPSCR1Q9BZE9 553 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 SLC39A1Q9NY26 324 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 TBC1D29Q9UFV1 150 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 B3GALT1Q9Y5Z6 326 aa16.83■□□□□ 0.28
SCAF1-204ENST00000601038 LRRD1A4D1F6 860 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 B4E171 279 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 DUX1O43812 170 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 NUAK1O60285 661 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 SFTPCP11686 197 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 SLC2A4P14672 509 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 TSPAN7P41732 249 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 ARHGAP25P42331 645 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 ZBTB17Q13105 803 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 SLC9A4Q6AI14 798 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 LYSMD3Q7Z3D4 306 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 SLC9B2Q86UD5 537 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-204ENST00000601038 JPH3Q8WXH2 748 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-204ENST00000601038 PMEPA1Q969W9 287 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 EID2BQ96D98 161 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 MAK16Q9BXY0 300 aaKnown RBP16.82■□□□□ 0.28
SCAF1-204ENST00000601038 CARD9Q9H257 536 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 STN1Q9H668 368 aaKnown RBP16.82■□□□□ 0.28
SCAF1-204ENST00000601038 ZFYVE1Q9HBF4 777 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 OCIAD1Q9NX40 245 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 KCNK6Q9Y257 313 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 HEY1Q9Y5J3 304 aa16.82■□□□□ 0.28
SCAF1-204ENST00000601038 CFAP46Q8IYW2 2715 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 KIR2DS5A0A0G2JLQ3 304 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 A0A0G2JNG1 304 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 A6NCN8 305 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 C3orf70A6NLC5 250 aaPredicted RBP16.81■□□□□ 0.28
SCAF1-204ENST00000601038 OR5K4A6NMS3 321 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
SCAF1-204ENST00000601038 KIR2DS3K7RE56 304 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms