RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 KDM7AQ6ZMT4 941 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 CYS1Q717R9 158 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 LPCAT2Q7L5N7 544 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 PIANPQ8IYJ0 282 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 OTUD6BQ8N6M0 293 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 PNPLA1Q8N8W4 532 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 HNRNPLLQ8WVV9 542 aaKnown RBP20.32■□□□□ 0.84
PNKP-215ENST00000600910 ORAI3Q9BRQ5 295 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 IARS2Q9NSE4 1012 aaKnown RBP20.32■□□□□ 0.84
PNKP-215ENST00000600910 DMTF1Q9Y222 760 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 ZNF318Q5VUA4 2279 aa20.32■□□□□ 0.84
PNKP-215ENST00000600910 CEP192Q8TEP8 1941 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 AGAP14A8MT82 685 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PRAMEF26H0Y7S4 382 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PIAS1O75925 651 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 ABHD2P08910 425 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 SEMA3AQ14563 771 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 INPP5AQ14642 412 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 GPR33Q49SQ1 333 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 BEND6Q5SZJ8 279 aaPredicted RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 ZNF470Q6ECI4 717 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 ARMCX6Q7L4S7 300 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 TAS2R42Q7RTR8 314 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 MREGQ8N565 214 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 SERAC1Q96JX3 654 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 FAM167BQ9BTA0 163 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 FUT8Q9BYC5 575 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 ARGLU1Q9NWB6 273 aaPredicted RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 EIF2B4Q9UI10 523 aaKnown RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 RABGEF1Q9UJ41 708 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 CRLS1Q9UJA2 301 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 TMPRSS11EQ9UL52 423 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 CA5BQ9Y2D0 317 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 A0A087WUV0 522 aaPredicted RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 FPGTO14772 594 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 C1QAP02745 245 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PYGLP06737 847 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 H2AFXP16104 143 aaPredicted RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 CD27P26842 260 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PTGER3P43115 390 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 CLDN2P57739 230 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 KBTBD12Q3ZCT8 623 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 TEDDM1Q5T9Z0 273 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PMS2CLQ68D20 193 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 MRNIPQ6NTE8 343 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 ZNF449Q6P9G9 518 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 LDB1Q86U70 411 aaPredicted RBP20.31■□□□□ 0.84
PNKP-215ENST00000600910 TMEM145Q8NBT3 493 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 GPR150Q8NGU9 434 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 CALML6Q8TD86 181 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 VPS35Q96QK1 796 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 SMYD2Q9NRG4 433 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 SMOXQ9NWM0 555 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 ZFATQ9P243 1243 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 SLC17A6Q9P2U8 582 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 PCDHGA2Q9Y5H1 932 aa20.31■□□□□ 0.84
PNKP-215ENST00000600910 CUL9Q8IWT3 2517 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 TRBV5-4A0A0C4DH59 114 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 POM121BA6NF01 834 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 FAM159BA6NKW6 160 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 H0Y8X5 98 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 INPP4BO15327 924 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 MAOBP27338 520 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CTBP1Q13363 440 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 PLK5Q496M5 336 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 SPDYCQ5MJ68 293 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 ADAMTSL4Q6UY14 1074 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 GCNT7Q6ZNI0 430 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CEP68Q76N32 757 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 SERPINA9Q86WD7 417 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CILP2Q8IUL8 1156 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 DENND6AQ8IWF6 608 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CNTN4Q8IWV2 1026 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 LMNTD2Q8IXW0 634 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 BTN2A2Q8WVV5 523 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CDKL2Q92772 493 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 GLYATL1Q969I3 302 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.3■□□□□ 0.84
PNKP-215ENST00000600910 ACSS3Q9H6R3 686 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 CNOT6Q9ULM6 557 aaKnown RBP20.3■□□□□ 0.84
PNKP-215ENST00000600910 SLCO1B1Q9Y6L6 691 aa20.3■□□□□ 0.84
PNKP-215ENST00000600910 THADAQ6YHU6 1953 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 CXorf49A8MYA2 514 aaPredicted RBP20.29■□□□□ 0.84
PNKP-215ENST00000600910 F7P08709 466 aaPredicted RBP20.29■□□□□ 0.84
PNKP-215ENST00000600910 TEAD1P28347 426 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 TRIM23P36406 574 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 SLC1A2P43004 574 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 EFTUD2Q15029 972 aaKnown RBP eCLIP20.29■□□□□ 0.847e-7■■■■■ 37.5
PNKP-215ENST00000600910 AARS2Q5JTZ9 985 aaKnown RBP20.29■□□□□ 0.84
PNKP-215ENST00000600910 SDCCAG8Q86SQ7 713 aaPredicted RBP20.29■□□□□ 0.84
PNKP-215ENST00000600910 HEATR4Q86WZ0 1026 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 NXPE1Q8N323 547 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 GABPB2Q8TAK5 448 aaPredicted RBP20.29■□□□□ 0.84
PNKP-215ENST00000600910 ULK4Q96C45 1275 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 BMFQ96LC9 184 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 CYTH2Q99418 400 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 WDR26Q9H7D7 661 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 OR1A2Q9Y585 309 aa20.29■□□□□ 0.84
PNKP-215ENST00000600910 PLXNB3Q9ULL4 1909 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms