RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SCNN1AP37088 669 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 GFERP55789 205 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 FANCCQ00597 558 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 PYCR3Q53H96 274 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 TRIM65Q6PJ69 517 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 GBP6Q6ZN66 633 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 GLIS1Q8NBF1 620 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 ST6GALNAC3Q8NDV1 305 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 ADAMTS17Q8TE56 1095 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 NUS1Q96E22 293 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-207ENST00000600244 SYNCQ9H7C4 482 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 SIX2Q9NPC8 291 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 NTNG1Q9Y2I2 539 aa17.46■□□□□ 0.39
SSBP4-207ENST00000600244 TOX3O15405 576 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-207ENST00000600244 TIAF1O95411 115 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 SLC9A1P19634 815 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 MAPK9P45984 424 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 NR1I3Q14994 352 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 EXOC3L4Q17RC7 722 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 FAM199XQ6PEV8 388 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-207ENST00000600244 IYDQ6PHW0 289 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 ZNF354CQ86Y25 554 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 ERGIC2Q96RQ1 377 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 CRACR2AQ9BSW2 395 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 TBC1D10AQ9BXI6 508 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 OGFRQ9NZT2 677 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 B3GNT3Q9Y2A9 372 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 SIK3Q9Y2K2 1263 aa17.45■□□□□ 0.38
SSBP4-207ENST00000600244 COPG1Q9Y678 874 aaKnown RBP17.45■□□□□ 0.38
SSBP4-207ENST00000600244 RASA4BC9J798 803 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 RASA4O43374 803 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 TPM2P07951 284 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
SSBP4-207ENST00000600244 GABRB2P47870 512 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 CSNK1DP48730 415 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 SEPHS1P49903 392 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 RAB6CQ53S08 254 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 ENOSF1Q7L5Y1 443 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 UBE2Q2Q8WVN8 375 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 TBC1D31Q96DN5 1066 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 RAB6CQ9H0N0 254 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 GPR83Q9NYM4 423 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 C5AR2Q9P296 337 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 TMEM59LQ9UK28 342 aa17.44■□□□□ 0.38
SSBP4-207ENST00000600244 G3BP2Q9UN86 482 aaKnown RBP17.44■□□□□ 0.38
SSBP4-207ENST00000600244 FARSAQ9Y285 508 aaKnown RBP17.44■□□□□ 0.38
SSBP4-207ENST00000600244 ZNF185O15231 689 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 SERPINA4P29622 427 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 HNRNPH3P31942 346 aaKnown RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 RGRP47804 291 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 YBEYP58557 167 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 RPS15P62841 145 aaKnown RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 POLR2LP62875 67 aaKnown RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 ART3Q13508 389 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 LRP8Q14114 963 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 FAM102AQ5T9C2 384 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 SRLQ86TD4 932 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 PPP1R3BQ86XI6 285 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 DTD2Q96FN9 168 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 STN1Q9H668 368 aaKnown RBP17.43■□□□□ 0.38
SSBP4-207ENST00000600244 ATP13A3Q9H7F0 1226 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 PDFQ9HBH1 243 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 PLCB1Q9NQ66 1216 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 B4GALT6Q9UBX8 382 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 TBC1D29Q9UFV1 150 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 TMEM98Q9Y2Y6 226 aa17.43■□□□□ 0.38
SSBP4-207ENST00000600244 A6NL46 340 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 TRAFD1O14545 582 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-207ENST00000600244 TMEM63AO94886 807 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 SERPINC1P01008 464 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 PBX1P40424 430 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 UBXN1Q04323 297 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 CNGA3Q16281 694 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 FKBP15Q5T1M5 1219 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 GJB7Q6PEY0 223 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 DOK6Q6PKX4 331 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 SARM1Q6SZW1 724 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 PHLDB2Q86SQ0 1253 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 SLC9B2Q86UD5 537 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
SSBP4-207ENST00000600244 INPP5DQ92835 1189 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 COPG2Q9UBF2 871 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 UBA2Q9UBT2 640 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-207ENST00000600244 APEX2Q9UBZ4 518 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 OSGIN2Q9Y236 505 aa17.42■□□□□ 0.38
SSBP4-207ENST00000600244 KLF2Q9Y5W3 355 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-207ENST00000600244 LILRA5A6NI73 299 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 PES1O00541 588 aaKnown RBP17.41■□□□□ 0.38
SSBP4-207ENST00000600244 USP8P40818 1118 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 ETV3P41162 512 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 UBASH3AP57075 661 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 APBA1Q02410 837 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 PTK2Q05397 1052 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 SYCP1Q15431 976 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 FILIP1LQ4L180 1135 aa17.41■□□□□ 0.38
SSBP4-207ENST00000600244 KLHDC7AQ5VTJ3 777 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms