RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ADRA1DP25100 572 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 EPHA8P29322 1005 aaPredicted RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 SPAM1P38567 509 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 ADCY8P40145 1251 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 NPY2RP49146 381 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 LMAN1P49257 510 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SRP54P61011 504 aaKnown RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 CRADDP78560 199 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SLC14A1Q13336 389 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 RBFAQ8N0V3 343 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 OXR1Q8N573 874 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 OR56A4Q8NGH8 313 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 NETO1Q8TDF5 533 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 BTN2A2Q8WVV5 523 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 LRRC45Q96CN5 670 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 CDKN2AIPNLQ96HQ2 116 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 HIC2Q96JB3 615 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 SIGLEC10Q96LC7 697 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 TBATAQ96M53 351 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SERPINB12Q96P63 405 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 VPS35Q96QK1 796 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 CLPBQ9H078 707 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 SUDS3Q9H7L9 328 aaPredicted RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 CHRAC1Q9NRG0 131 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 PHPT1Q9NRX4 125 aaPredicted RBP13.64□□□□□ -0.23
VRK3-219ENST00000600137 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 BTBD3Q9Y2F9 522 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 TCAF1Q9Y4C2 921 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
VRK3-219ENST00000600137 TRBV5-4A0A0C4DH59 114 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 GLYATL1P3A0A0U1RQE8 302 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 CACNB4O00305 520 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 CBFA2T3O75081 653 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 CELA2BP08218 269 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 MLNP12872 115 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 MGAT1P26572 445 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 CCT8P50990 548 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 HK3P52790 923 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ATXN3P54252 364 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 TMPRSS15P98073 1019 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 PDE1BQ01064 536 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 IL9RQ01113 521 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 CBLBQ13191 982 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 TSTD2Q5T7W7 516 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ZDHHC20Q5W0Z9 365 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 HIBCHQ6NVY1 386 aaPredicted RBP13.63□□□□□ -0.23
VRK3-219ENST00000600137 FAM151BQ6UXP7 276 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 GATAD2AQ86YP4 633 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 PPIL6Q8IXY8 311 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 MPP5Q8N3R9 675 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ZNF398Q8TD17 642 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 GLYATL1Q969I3 302 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 PDXPQ96GD0 296 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 KIFC1Q9BW19 673 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 TREX1Q9NSU2 369 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 DNAJC28Q9NX36 388 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 DLL3Q9NYJ7 618 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ASIC3Q9UHC3 531 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 PKP3Q9Y446 797 aa13.63□□□□□ -0.23
VRK3-219ENST00000600137 ARHGEF17Q96PE2 2063 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 PRSS38A1L453 326 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 HEATR9A2RTY3 570 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 GOLGA8MH3BSY2 632 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 SDC3O75056 442 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 DNAJC6O75061 913 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 SRP72O76094 671 aaKnown RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 SEC31AO94979 1220 aaKnown RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 IVLP07476 585 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 PRSS56P0CW18 603 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 JUNDP17535 347 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 HTR1BP28222 390 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 RPL21P46778 160 aaKnown RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 ARRB1P49407 418 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 CDKN1CP49918 316 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 HNRNPKP61978 463 aaKnown RBP eCLIP13.62□□□□□ -0.23
VRK3-219ENST00000600137 PPARDQ03181 441 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 TRADDQ15628 312 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 RSPO4Q2I0M5 234 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 UAP1L1Q3KQV9 507 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 MSS51Q4VC12 460 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 IZUMO3Q5VZ72 239 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 ADGRG6Q86SQ4 1221 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms