RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 NUS1Q96E22 293 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 STAMBPL1Q96FJ0 436 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 RANBP9Q96S59 729 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 AGAP2Q99490 1192 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 KIFC1Q9BW19 673 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 C1QTNF7Q9BXJ2 289 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 GAREM1Q9H706 876 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 ZFYVE1Q9HBF4 777 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 BPIFA1Q9NP55 256 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 CHRAC1Q9NRG0 131 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 HACD3Q9P035 362 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 SAMD15Q9P1V8 674 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PNMA8BQ9ULN7 279 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-207ENST00000597136 SOX13Q9UN79 622 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 TCAF1Q9Y4C2 921 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 OR1A2Q9Y585 309 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 MROH6A6NGR9 719 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 LDB2O43679 373 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF30P17039 623 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 SPINT3P49223 89 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 PMS2P54278 862 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 SEPT6Q14141 434 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 SHBQ15464 509 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 STPG1Q5TH74 334 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 PNCKQ6P2M8 343 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 KYAT3Q6YP21 454 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 PPHLN1Q8NEY8 458 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 PTCD2Q8WV60 388 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 C9orf72Q96LT7 481 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 SRPK1Q96SB4 655 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 TRIM56Q9BRZ2 755 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 NAT9Q9BTE0 207 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 APOOQ9BUR5 198 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 LGR4Q9BXB1 951 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 GPR63Q9BZJ6 419 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 TRABDQ9H4I3 376 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 GPR27Q9NS67 375 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 ZC3H7BQ9UGR2 993 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 FNDC3AQ9Y2H6 1198 aaKnown RBP14.92□□□□□ -0.02
TRIM28-207ENST00000597136 KCTD3Q9Y597 815 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 ARL5AQ9Y689 179 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 UNC13CQ8NB66 2214 aa14.92□□□□□ -0.02
TRIM28-207ENST00000597136 FAM237BA0A1B0GVD1 139 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 HEATR9A2RTY3 570 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 IL9RQ01113 521 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 LAMB3Q13751 1172 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 PDE1CQ14123 709 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 FZD2Q14332 565 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 TAF1AQ15573 450 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 KYNUQ16719 465 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF423Q2M1K9 1284 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 UAP1L1Q3KQV9 507 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 BEND6Q5SZJ8 279 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 MICALCLQ6ZW33 695 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 GLT6D1Q7Z4J2 308 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 TMEM135Q86UB9 458 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 CCNJLQ8IV13 435 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 GPR26Q8NDV2 337 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 AP2M1Q96CW1 435 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF778Q96MU6 729 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 RIOK2Q9BVS4 552 aaKnown RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 CDC42EP4Q9H3Q1 356 aaKnown RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 PLAC1Q9HBJ0 212 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 MRM3Q9HC36 420 aaKnown RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 TMEM9BQ9NQ34 198 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 ARGLU1Q9NWB6 273 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-207ENST00000597136 NINJ2Q9NZG7 142 aa14.91□□□□□ -0.02
TRIM28-207ENST00000597136 CRTAMO95727 393 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 TTC4O95801 387 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 SOD1P00441 154 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 PGAM1P18669 254 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 TRIM23P36406 574 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 RABIFP47224 123 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 ATXN3P54252 364 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-207ENST00000597136 OVGP1Q12889 678 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 BNIP3Q12983 259 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 STEAP4Q687X5 459 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 ESRP1Q6NXG1 681 aaKnown RBP14.9□□□□□ -0.02
TRIM28-207ENST00000597136 FBXO38Q6PIJ6 1188 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 TRMT10CQ7L0Y3 403 aaKnown RBP14.9□□□□□ -0.02
TRIM28-207ENST00000597136 NLRP9Q7RTR0 991 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 PALM2Q8IXS6 379 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 SKA1Q96BD8 255 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 CFAP36Q96G28 342 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 ZDHHC5Q9C0B5 715 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 LRRC4CQ9HCJ2 640 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 KLF15Q9UIH9 416 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 CCDC78A2IDD5 438 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 C2orf81A6NN90 581 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 POLBP06746 335 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 BPIP17213 487 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 NMBRP28336 390 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF140P52738 457 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-207ENST00000597136 GPX6P59796 221 aa14.9□□□□□ -0.02
TRIM28-207ENST00000597136 PDE1BQ01064 536 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms