RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 MROH9Q5TGP6 573 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 KCTD16Q68DU8 428 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 CWF19L1Q69YN2 538 aaKnown RBP14.57□□□□□ -0.08
VRK3-212ENST00000596814 KIAA1161Q6NSJ0 714 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 CERS6Q6ZMG9 384 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 ZNF765Q7L2R6 523 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 TRAM1L1Q8N609 369 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 MZB1Q8WU39 189 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 AP2M1Q96CW1 435 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 TTC1Q99614 292 aa14.57□□□□□ -0.08
VRK3-212ENST00000596814 RIOK2Q9BVS4 552 aaKnown RBP14.57□□□□□ -0.08
VRK3-212ENST00000596814 NOVA2Q9UNW9 492 aaKnown RBP14.57□□□□□ -0.08
VRK3-212ENST00000596814 HMX2A2RU54 273 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 IGLON5A6NGN9 336 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 AGAP14A8MT82 685 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 HAUS5O94927 633 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 APBB3O95704 486 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 UGT1A6P19224 532 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 UGT1A1P22309 533 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 UGT1A4P22310 534 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 UGT1A3P35503 534 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 UGT1A5P35504 534 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 MAGEA9P43362 315 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 CLCN5P51795 746 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 RPS21P63220 83 aaKnown RBP14.56□□□□□ -0.08
VRK3-212ENST00000596814 ILF2Q12905 390 aaKnown RBP14.56□□□□□ -0.08
VRK3-212ENST00000596814 MTAPQ13126 283 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 ATP13A5Q4VNC0 1218 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 SETMARQ53H47 684 aaPredicted RBP14.56□□□□□ -0.08
VRK3-212ENST00000596814 LYPLAL1Q5VWZ2 237 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 SEL1L3Q68CR1 1132 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 SERPINA9Q86WD7 417 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 ULK4Q96C45 1275 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 TLCD1Q96CP7 247 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 GPR22Q99680 433 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 BTBD1Q9H0C5 482 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 KDM4CQ9H3R0 1056 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 SMOXQ9NWM0 555 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 EBF1Q9UH73 591 aa14.56□□□□□ -0.08
VRK3-212ENST00000596814 ZFR2Q9UPR6 939 aaKnown RBP14.56□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3DA0A087WVF3 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3IA0A087WXS9 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3EA0A087X179 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3KA0A087X1G2 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 A0A1W2PQU0 124 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 UBA6A0AVT1 1052 aaPredicted RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3FA6NER0 549 aaPredicted RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3LB9A6J9 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 RNGTTO60942 597 aaKnown RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 IGLV3-19P01714 112 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3HP0C7X1 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 ACRV1P26436 265 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 DBN1Q16643 649 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3GQ6DHY5 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3CQ6IPX1 549 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 NEK5Q6P3R8 708 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TRABD2AQ86V40 505 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 SRRM1Q8IYB3 904 aaKnown RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 TBC1D3Q8IZP1 549 aaPredicted RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 NXPE1Q8N323 547 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 DCLK2Q8N568 766 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 LPGAT1Q92604 370 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 SGK2Q9HBY8 427 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 SENP1Q9P0U3 644 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 CORO1CQ9ULV4 474 aaPredicted RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 CRYL1Q9Y2S2 319 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 FAM95CA0A1B0GW59 222 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 FAM47DPA6NHR8 397 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 FADS2P1A8MWK0 482 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 FOXO6A8MYZ6 492 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 PDGFBP01127 241 aaPredicted RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 MT-ND3P03897 115 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 CA5AP35218 305 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 MAGOHP61326 146 aaKnown RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 DPTQ07507 201 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 DNAJC3Q13217 504 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 AGERQ15109 404 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TMEM259Q4ZIN3 620 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TMEM31Q5JXX7 168 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 RAET1GQ6H3X3 334 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 HORMAD1Q86X24 394 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 GPATCH11Q8N954 259 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 OR2T34Q8NGX1 318 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 MTO1Q9Y2Z2 717 aaKnown RBP14.55□□□□□ -0.08
VRK3-212ENST00000596814 NCOR1O75376 2440 aa14.55□□□□□ -0.08
VRK3-212ENST00000596814 TECTAO75443 2155 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 ACSL1P33121 698 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 PTGER3P43115 390 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 SERPINB8P50452 374 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 CCR3P51677 355 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 PPP2CBP62714 309 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 PPP2CAP67775 309 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 ITIH4Q14624 930 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 MAP7D1Q3KQU3 841 aa14.54□□□□□ -0.08
VRK3-212ENST00000596814 RBM20Q5T481 1227 aaKnown RBP14.54□□□□□ -0.08
VRK3-212ENST00000596814 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms