RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TNRC6AQ8NDV7 1962 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 NKX2-8O15522 239 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 MFSD11O43934 449 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 DNAJC6O75061 913 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 PRKAR1AP10644 381 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ACP5P13686 325 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 CA4P22748 312 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 CES1P23141 567 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 MAP4P27816 1152 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 GJC1P36383 396 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 GARSP41250 739 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 NOP2P46087 812 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ZNF165P49910 485 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 STC1P52823 247 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 MC2RQ01718 297 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 SKIDA1Q1XH10 827 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ANO6Q4KMQ2 910 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 COLEC12Q5KU26 742 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ARHGAP22Q7Z5H3 698 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 LPCAT1Q8NF37 534 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ZNF564Q8TBZ8 553 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC45A3Q96JT2 553 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 NUP85Q9BW27 656 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 THAP2Q9H0W7 228 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 SARS2Q9NP81 518 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 ZNF71Q9NQZ8 489 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 PDP2Q9P2J9 529 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 KCNK6Q9Y257 313 aa10.47□□□□□ -0.73
CHMP2A-202ENST00000596708 C1orf232A0A0U1RR37 186 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 MYO1FO00160 1098 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 MATN3O15232 486 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 CD48P09326 243 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC2A4P14672 509 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 IL4RP24394 825 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 CCNCP24863 283 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC25A11Q02978 314 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 ATP13A4Q4VNC1 1196 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 ANKRD20A8PQ5CZ79 823 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 C16orf46Q6P387 395 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 IYDQ6PHW0 289 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 WDR74Q6RFH5 385 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 UNC5BQ8IZJ1 945 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 NIPA2Q8N8Q9 360 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 BMPERQ8N8U9 685 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 KCTD6Q8NC69 237 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 CCHCR1Q8TD31 782 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 LRRN4Q8WUT4 740 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 MAML1Q92585 1016 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 ZPBPQ9BS86 351 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 TDRD1Q9BXT4 1180 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 TRIT1Q9H3H1 467 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 FAM83DQ9H4H8 585 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 PCDH9Q9HC56 1237 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 APMAPQ9HDC9 416 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 FBXO8Q9NRD0 319 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 VPS18Q9P253 973 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 RCOR3Q9P2K3 495 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 TBC1D29Q9UFV1 150 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 TUBD1Q9UJT1 453 aa10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 CNOT6Q9ULM6 557 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 PCYT1BQ9Y5K3 369 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 OAS3Q9Y6K5 1087 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-202ENST00000596708 SPTBP11277 2137 aa10.46□□□□□ -0.74
CHMP2A-202ENST00000596708 MED13Q9UHV7 2174 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 A0A1B0GTH6 734 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 OR5K4A6NMS3 321 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 POLR1CO15160 346 aaPredicted RBP10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 GRID2O43424 1007 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 STK17BO94768 372 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 SERPINC1P01008 464 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 PRLP01236 227 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 HLA-DQB2P05538 268 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 F3P13726 295 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 TCN2P20062 427 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 SPINT3P49223 89 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 EPHA4P54764 986 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 MC1RQ01726 317 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 FOXM1Q08050 763 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 NIPAL4Q0D2K0 466 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 ABHD18Q0P651 414 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 GALNT2Q10471 571 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 CDC20Q12834 499 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 DPYSL3Q14195 570 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 IHHQ14623 411 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 PAFAH1B3Q15102 231 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 DEFB109BQ30KR1 87 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 ZFYVE27Q5T4F4 411 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 TIPARPQ7Z3E1 657 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 RAVER1Q8IY67 606 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 CCNYQ8ND76 341 aa10.45□□□□□ -0.74
CHMP2A-202ENST00000596708 C9orf43Q8TAL5 461 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms