RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KDELC1Q6UW63 502 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 RAB11FIP2Q7L804 512 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 ZC3H18Q86VM9 953 aaKnown RBP12.95□□□□□ -0.34
LIG1-212ENST00000596549 GALNT13Q8IUC8 556 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 ARL14Q8N4G2 192 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 GPR26Q8NDV2 337 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 TFB1MQ8WVM0 346 aaKnown RBP12.95□□□□□ -0.34
LIG1-212ENST00000596549 KCNE4Q8WWG9 221 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 TEKT5Q96M29 485 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 FCRL3Q96P31 734 aaPredicted RBP12.95□□□□□ -0.34
LIG1-212ENST00000596549 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIG1-212ENST00000596549 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 ADGRE3Q9BY15 652 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 ZFYVE1Q9HBF4 777 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 UBP1Q9NZI7 540 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 SPO11Q9Y5K1 396 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
LIG1-212ENST00000596549 F5H423 210 aaPredicted RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 PLD2O14939 933 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 AURKAO14965 403 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 PPM1DO15297 605 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 B4GAT1O43505 415 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 TNFSF15O95150 251 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ITGA2BP08514 1039 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ITIH1P19827 911 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 CTNNA1P35221 906 aaKnown RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 UGT1A5P35504 534 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 OR1D5P58170 312 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ZNF648Q5T619 568 aaPredicted RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 TMC3Q7Z5M5 1100 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 CCDC50Q8IVM0 306 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ZNF567Q8N184 647 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ACRBPQ8NEB7 543 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 CCHCR1Q8TD31 782 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 SLC37A2Q8TED4 501 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 TMEM74Q96NL1 305 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 GORASP1Q9BQQ3 440 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 NUDT22Q9BRQ3 303 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ANP32EQ9BTT0 268 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 SEMA6CQ9H3T2 930 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 RDH14Q9HBH5 336 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 MAGEE1Q9HCI5 957 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 DUSP10Q9Y6W6 482 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
LIG1-212ENST00000596549 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
LIG1-212ENST00000596549 SMG1Q96Q15 3661 aaKnown RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 RGSL1A5PLK6 1076 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 A6NCN8 305 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 AGRPO00253 132 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 PMPCBO75439 489 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
LIG1-212ENST00000596549 ASMTLO95671 621 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 NDST3O95803 873 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 BPIP17213 487 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 RBMS1P29558 406 aaKnown RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 ETV5P41161 510 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 CHRNA4P43681 627 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 EIF3IQ13347 325 aaKnown RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 LRP8Q14114 963 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 C16orf72Q14CZ0 275 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 SPA17Q15506 151 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 KHDC1Q4VXA5 237 aaKnown RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 ZNF569Q5MCW4 686 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 BBS12Q6ZW61 710 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 CHST15Q7LFX5 561 aaPredicted RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 ZNF761Q86XN6 746 aaPredicted RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 FBXO39Q8N4B4 442 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 P3H4Q92791 437 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 ATXN10Q9UBB4 475 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 KCNK6Q9Y257 313 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 LOXL2Q9Y4K0 774 aa12.93□□□□□ -0.34
LIG1-212ENST00000596549 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
LIG1-212ENST00000596549 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 LOC285095A0A1B0GVY8 99 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 RHPN2P1A8MT19 583 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 BTNL10A8MVZ5 291 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 APOC4-APOC2K7ER74 178 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 PJA2O43164 708 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 KLK10O43240 276 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 NUAK1O60285 661 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 CPNE6O95741 557 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 APOC2P02655 101 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 ACP5P13686 325 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 ZNF8P17098 575 aaPredicted RBP12.92□□□□□ -0.34
LIG1-212ENST00000596549 CD1CP29017 333 aa12.92□□□□□ -0.34
LIG1-212ENST00000596549 FASLGP48023 281 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms