RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SNF8Q96H20 258 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 SGSM3Q96HU1 749 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 VPS35Q96QK1 796 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 IL22Q9GZX6 179 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 CDH19Q9H159 772 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 ERVMER34-1Q9H9K5 563 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 MRM3Q9HC36 420 aaKnown RBP10.5□□□□□ -0.73
LIG1-210ENST00000596332 FGF22Q9HCT0 170 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 MRPL40Q9NQ50 206 aaKnown RBP10.5□□□□□ -0.73
LIG1-210ENST00000596332 PKD2L2Q9NZM6 624 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 WHRNQ9P202 907 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 SUSD2Q9UGT4 822 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 SOX13Q9UN79 622 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 SLC17A4Q9Y2C5 497 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 TMEM98Q9Y2Y6 226 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.5□□□□□ -0.73
LIG1-210ENST00000596332 TEX264Q9Y6I9 313 aa10.5□□□□□ -0.73
LIG1-210ENST00000596332 ZNF106Q9H2Y7 1883 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 HEATR9A2RTY3 570 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 CCDC162PA2VCL2 907 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 TM4SF5O14894 197 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 KHNYNO15037 678 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 STX7O15400 261 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 PPFIA2O75334 1257 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 SRP72O76094 671 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 SLC4A1P02730 911 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 C1QAP02745 245 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 MYCLP1P12525 358 aaPredicted RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 GNSP15586 552 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 NFKBIAP25963 317 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 FOXN2P32314 431 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 SPAM1P38567 509 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 RABIFP47224 123 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 LMAN1P49257 510 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 GUCY2DQ02846 1103 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 DHX9Q08211 1270 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 BNIP3Q12983 259 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 NFATC4Q14934 902 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 FASTKD3Q14CZ7 662 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 ALG11Q2TAA5 492 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 ZNF542PQ5EBM4 170 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 UBAP2Q5T6F2 1119 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 PSAPL1Q6NUJ1 521 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 FAM151BQ6UXP7 276 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 PRR23CQ6ZRP0 262 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 C11orf96Q7Z7L8 435 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 PCGF5Q86SE9 256 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 ADGRG6Q86SQ4 1221 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 DCP2Q8IU60 420 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 UNC5BQ8IZJ1 945 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 SLC25A45Q8N413 288 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 FBXO25Q8TCJ0 367 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 ZNF398Q8TD17 642 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 NAT14Q8WUY8 206 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 PEX13Q92968 403 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 GLYATL1Q969I3 302 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 HDAC10Q969S8 669 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 TSACCQ96A04 125 aaPredicted RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 SPATA16Q9BXB7 569 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 C1QTNF7Q9BXJ2 289 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 CLPBQ9H078 707 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 FAM96AQ9H5X1 160 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 XAB2Q9HCS7 855 aaKnown RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 ARFGAP3Q9NP61 516 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 GDF3Q9NR23 364 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 BFARQ9NZS9 450 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 MARCH4Q9P2E8 410 aaPredicted RBP10.49□□□□□ -0.73
LIG1-210ENST00000596332 ANAPC5Q9UJX4 755 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 GMEB2Q9UKD1 530 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 PI4KAP42356 2102 aa10.49□□□□□ -0.73
LIG1-210ENST00000596332 ADAMTS9Q9P2N4 1935 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 PLXNB3Q9ULL4 1909 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 DMXL1Q9Y485 3027 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 IGLV3-16A0A075B6K0 115 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 GLYATL1P3A0A0U1RQE8 302 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 A0A1B0GTQ1 180 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 FAM237BA0A1B0GVD1 139 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 CHUKO15111 745 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 INPP4BO15327 924 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 GFRA3O60609 400 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 CSF2P04141 144 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 CFIP05156 583 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 CELA2BP08218 269 aaPredicted RBP10.48□□□□□ -0.73
LIG1-210ENST00000596332 GPR1P46091 355 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 NFATC2Q13469 925 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 ANKRD20A4Q4UJ75 823 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 ZNF658BQ4V348 819 aaPredicted RBP10.48□□□□□ -0.73
LIG1-210ENST00000596332 GLE1Q53GS7 698 aaKnown RBP10.48□□□□□ -0.73
LIG1-210ENST00000596332 ARMC3Q5W041 872 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 PDPK2PQ6A1A2 396 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 RAET1GQ6H3X3 334 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 C8orf74Q6P047 294 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 MACC1Q6ZN28 852 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 PTAR1Q7Z6K3 402 aaPredicted RBP10.48□□□□□ -0.73
LIG1-210ENST00000596332 NRROSQ86YC3 692 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 ZNF547Q8IVP9 402 aa10.48□□□□□ -0.73
LIG1-210ENST00000596332 RBFAQ8N0V3 343 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms