RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 GLYATL1Q969I3 302 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 PDXPQ96GD0 296 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 KRT12Q99456 494 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 SLC32A1Q9H598 525 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 UCKL1Q9NWZ5 548 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 BFARQ9NZS9 450 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 FKBPLQ9UIM3 349 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 APPL1Q9UKG1 709 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 SLC17A4Q9Y2C5 497 aa14.25□□□□□ -0.13
LIG1-208ENST00000595758 TP53BP1Q12888 1972 aaPredicted RBP14.25□□□□□ -0.13
LIG1-208ENST00000595758 PRSS38A1L453 326 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 HEATR9A2RTY3 570 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 DCDC2BA2VCK2 349 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 NEMP2A6NFY4 417 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 MROH6A6NGR9 719 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 SCAMP1O15126 338 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 AQP9O43315 295 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A9O60656 530 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 IVLP07476 585 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CTSEP14091 401 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A6P19224 532 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CSRP1P21291 193 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A1P22309 533 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A4P22310 534 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 ADRA1DP25100 572 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A3P35503 534 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A5P35504 534 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 ID4P47928 161 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CKAP4Q07065 602 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 ITGA9Q13797 1035 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 DHX34Q14147 1143 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 SKIDA1Q1XH10 827 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 ANKRD22Q5VYY1 191 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 LRRC8BQ6P9F7 803 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 NLRP9Q7RTR0 991 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 JAMLQ86YT9 394 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 FSTL5Q8N475 847 aaPredicted RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 EID2Q8N6I1 236 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 DEFB124Q8NES8 71 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 ZNF398Q8TD17 642 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 RHBDD1Q8TEB9 315 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 STYXQ8WUJ0 223 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 DNAJC1Q96KC8 554 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 TBATAQ96M53 351 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CAMK1GQ96NX5 476 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 RANBP9Q96S59 729 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 LRRC61Q9BV99 259 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CARS2Q9HA77 564 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A7Q9HAW7 530 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A10Q9HAW8 530 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 UGT1A8Q9HAW9 530 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 NLE1Q9NVX2 485 aaPredicted RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 BTBD3Q9Y2F9 522 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 OAS3Q9Y6K5 1087 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 CSNK1G3Q9Y6M4 447 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 DMXL1Q9Y485 3027 aa14.24□□□□□ -0.13
LIG1-208ENST00000595758 CNOT1A5YKK6 2376 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 TDRD6O60522 2096 aaKnown RBP14.24□□□□□ -0.13
LIG1-208ENST00000595758 CCDC78A2IDD5 438 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 CCL22O00626 93 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 GAPDHSO14556 408 aaPredicted RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 FFAR2O15552 330 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 TTI1O43156 1089 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 SRP72O76094 671 aaKnown RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 PRAMEF1O95521 474 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 FUCA1P04066 466 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 GNPDA1P46926 289 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 XIAPP98170 497 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 C1orf61Q13536 156 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 ELOCQ15369 112 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 PCID2Q5JVF3 399 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 ZNF534Q76KX8 674 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 PHYKPLQ8IUZ5 450 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 PPIL6Q8IXY8 311 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 MCUQ8NE86 351 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 PPHLN1Q8NEY8 458 aaKnown RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 KIF18AQ8NI77 898 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 GDAP1Q8TB36 358 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 PTCD2Q8WV60 388 aaKnown RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 SCARF2Q96GP6 870 aaPredicted RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 VPS35Q96QK1 796 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 IL22Q9GZX6 179 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 SUDS3Q9H7L9 328 aaPredicted RBP14.23□□□□□ -0.13
LIG1-208ENST00000595758 TRIM39Q9HCM9 518 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 ARFGAP3Q9NP61 516 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 VPS18Q9P253 973 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 PCOLCE2Q9UKZ9 415 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 TMPRSS11EQ9UL52 423 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 SUFUQ9UMX1 484 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 TCAF1Q9Y4C2 921 aa14.23□□□□□ -0.13
LIG1-208ENST00000595758 LMO7DNF2Z398 122 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 GOLGA8MH3BSY2 632 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TRIM38O00635 465 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 CBFA2T3O75081 653 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 TMEM63AO94886 807 aa14.22□□□□□ -0.13
LIG1-208ENST00000595758 ANXA6P08133 673 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms