RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 SLC37A2Q8TED4 501 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 PMEPA1Q969W9 287 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 RNF25Q96BH1 459 aaPredicted RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 EID2BQ96D98 161 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 MAK16Q9BXY0 300 aaKnown RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 ZMYND15Q9H091 742 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 FAM83DQ9H4H8 585 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 ABHD10Q9NUJ1 306 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 KCNK4Q9NYG8 393 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 AKAP7Q9P0M2 348 aaPredicted RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 DNPEPQ9ULA0 475 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 RPL26L1Q9UNX3 145 aaKnown RBP16.9■□□□□ 0.3
CCDC9-202ENST00000595659 KCNK6Q9Y257 313 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 KIF26BQ2KJY2 2108 aa16.9■□□□□ 0.3
CCDC9-202ENST00000595659 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 APOL1O14791 398 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 CBFA2T2O43439 604 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 KALRNO60229 2985 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 SNX2O60749 519 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 KRT1P04264 644 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 PYGLP06737 847 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 FGF3P11487 239 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-202ENST00000595659 ACP5P13686 325 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 PLA2G2AP14555 144 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 LIMK2P53671 638 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 IFI35P80217 286 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-202ENST00000595659 PEX6Q13608 980 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 PCSK7Q16549 785 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 MANEAQ5SRI9 462 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 WBP1Q96G27 269 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 CCDC42Q96M95 316 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 LYSMD1Q96S90 227 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 SLC38A3Q99624 504 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 PKD2L2Q9NZM6 624 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 TBC1D29Q9UFV1 150 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 LCMT1Q9UIC8 334 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 ACSL6Q9UKU0 697 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.29
CCDC9-202ENST00000595659 SHROOM3Q8TF72 1996 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 ZW10O43264 779 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 WT1P19544 449 aaPredicted RBP16.88■□□□□ 0.29
CCDC9-202ENST00000595659 NFATC2Q13469 925 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 TRIM14Q14142 442 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 SNAP47Q5SQN1 464 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 HENMT1Q5T8I9 393 aaKnown RBP16.88■□□□□ 0.29
CCDC9-202ENST00000595659 SLC9A4Q6AI14 798 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 SPATA22Q8NHS9 363 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 AHCYL2Q96HN2 611 aaKnown RBP16.88■□□□□ 0.29
CCDC9-202ENST00000595659 ADGRE3Q9BY15 652 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 PCDHB11Q9Y5F2 797 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 ATMQ13315 3056 aa16.88■□□□□ 0.29
CCDC9-202ENST00000595659 A8MU76 341 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 MFAP3LO75121 409 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 TPM1P09493 284 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 ARHGAP25P42331 645 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 NOP2P46087 812 aaKnown RBP16.87■□□□□ 0.29
CCDC9-202ENST00000595659 ARSDP51689 593 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 CYP4F2P78329 520 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 LRP8Q14114 963 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 ODF2Q5BJF6 829 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 TMEM164Q5U3C3 297 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 MFSD7Q6UXD7 560 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 NT5DC3Q86UY8 548 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 SFRP1Q8N474 314 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 EXD3Q8N9H8 876 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 OR4D9Q8NGE8 314 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 SGF29Q96ES7 293 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 TRIB3Q96RU7 358 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 SPATA16Q9BXB7 569 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 OR2AG1Q9H205 316 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 ZFYVE1Q9HBF4 777 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 OCIAD1Q9NX40 245 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 VPS18Q9P253 973 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 ATXN10Q9UBB4 475 aa16.87■□□□□ 0.29
CCDC9-202ENST00000595659 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
CCDC9-202ENST00000595659 PYCARD-AS1I3L0S3 204 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 HGSO14964 777 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 MT-CYBP00156 380 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 THRAP10827 490 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 ZNF8P17098 575 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 COMTP21964 271 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 CSTF2P33240 577 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 MAPK9P45984 424 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 FASLGP48023 281 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 HHEXQ03014 270 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 PDK1Q15118 436 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 CLPPQ16740 277 aaPredicted RBP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 IYDQ6PHW0 289 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 FAM129CQ86XR2 697 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 DTX1Q86Y01 620 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 GPR26Q8NDV2 337 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 EXTL1Q92935 676 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 ART4Q93070 314 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 IMP4Q96G21 291 aaKnown RBP16.86■□□□□ 0.29
CCDC9-202ENST00000595659 OLFM3Q96PB7 478 aa16.86■□□□□ 0.29
CCDC9-202ENST00000595659 TAAR9Q96RI9 348 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms