RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF362Q5T0B9 420 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 LINGO4Q6UY18 593 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 ZYG11AQ6WRX3 759 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 KIAA0408Q6ZU52 694 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 FRMD7Q6ZUT3 714 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 OR13C4Q8NGS5 318 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 NSMCE3Q96MG7 304 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 PSKH2Q96QS6 385 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 YME1L1Q96TA2 773 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 MGME1Q9BQP7 344 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 GPATCH1Q9BRR8 931 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 HERC2P3Q9BVR0 1158 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 RC3H2Q9HBD1 1191 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF334Q9HCZ1 680 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 MYRFQ9Y2G1 1151 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 INSL5Q9Y5Q6 135 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 TEX28O15482 410 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 SLC4A1P02730 911 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 FGF1P05230 155 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 HLA-DPA1P20036 260 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 LEPRP48357 1165 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 IDH3AP50213 366 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 EPHB3P54753 998 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 NAGLUP54802 743 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 POU4F1Q01851 419 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 CSHL1Q14406 222 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 TXNDC8Q6A555 127 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 GPR180Q86V85 440 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 ARL14EPQ8N8R7 260 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 PLEKHA8Q96JA3 519 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 GPR78Q96P69 363 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 MRPL17Q9NRX2 175 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 CRYL1Q9Y2S2 319 aa17.01■□□□□ 0.31
SHKBP1-205ENST00000594973 KIAA0100Q14667 2235 aaKnown RBP17■□□□□ 0.31
SHKBP1-205ENST00000594973 ILVBLA1L0T0 632 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 SLC7A4O43246 635 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 C1RP00736 705 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 COX4I1P13073 169 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 LAG3P18627 525 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 CDH3P22223 829 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 POLD2P49005 469 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 C21orf59P57076 290 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 ANKDD1AQ495B1 522 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 FSCBQ5H9T9 825 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 LIPMQ5VYY2 423 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 OTOP2Q7RTS6 562 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 DDX53Q86TM3 631 aaKnown RBP17■□□□□ 0.31
SHKBP1-205ENST00000594973 CARNMT1Q8N4J0 409 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
SHKBP1-205ENST00000594973 STYXQ8WUJ0 223 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 HEXDCQ8WVB3 486 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 TRIM43Q96BQ3 446 aaPredicted RBP17■□□□□ 0.31
SHKBP1-205ENST00000594973 RMDN1Q96DB5 314 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 CCDC68Q9H2F9 335 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 MID2Q9UJV3 735 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 RNF11Q9Y3C5 154 aa17■□□□□ 0.31
SHKBP1-205ENST00000594973 PRSS51A0A1B0GVH4 220 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 RXRGP48443 463 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 ESRRGP62508 458 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 DEPDC1Q5TB30 811 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 SLC2A7Q6PXP3 512 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 CENPSQ8N2Z9 138 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 TDRD5Q8NAT2 981 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 RDH11Q8TC12 318 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 EME1Q96AY2 570 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 SMIM14Q96QK8 99 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 PAIP1Q9H074 479 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 MFSD1Q9H3U5 465 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 COG4Q9H9E3 785 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 PNPLA3Q9NST1 481 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 GNPTGQ9UJJ9 305 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 H0Y626 953 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF195O14628 629 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 INSIG1O15503 277 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 DLX3O60479 287 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 SNAP91O60641 907 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 TBL1XO60907 577 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 GOT2P00505 430 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 FUCA1P04066 466 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 MPSTP25325 297 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 RFC2P35250 354 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 ZXDBP98169 803 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 CYTH1Q15438 398 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 ZBED5Q49AG3 693 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 HECTD2Q5U5R9 776 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 CXorf57Q6NSI4 855 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 GPR141Q7Z602 305 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 SETD3Q86TU7 594 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 BRSK1Q8TDC3 778 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 ISOC1Q96CN7 298 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 PPP1R36Q96LQ0 422 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 HEPHQ9BQS7 1158 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 OSBPL11Q9BXB4 747 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 SCUBE2Q9NQ36 999 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 DOLKQ9UPQ8 538 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms