RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZNF71Q9NQZ8 489 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-212ENST00000593251 TBC1D29Q9UFV1 150 aa17.33■□□□□ 0.36
RETREG3-212ENST00000593251 SNX2O60749 519 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 ACP5P13686 325 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 IL4RP24394 825 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 SLC25A11Q02978 314 aaKnown RBP17.32■□□□□ 0.36
RETREG3-212ENST00000593251 IGFBP7Q16270 282 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 LPCAT1Q8NF37 534 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 TEKT4Q8WW24 435 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 KIAA1143Q96AT1 154 aaPredicted RBP17.32■□□□□ 0.36
RETREG3-212ENST00000593251 TEFMQ96QE5 360 aaKnown RBP17.32■□□□□ 0.36
RETREG3-212ENST00000593251 WDR24Q96S15 920 aa17.32■□□□□ 0.36
RETREG3-212ENST00000593251 TDRD1Q9BXT4 1180 aaKnown RBP17.32■□□□□ 0.36
RETREG3-212ENST00000593251 CNOT6Q9ULM6 557 aaKnown RBP17.32■□□□□ 0.36
RETREG3-212ENST00000593251 RELNP78509 3460 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 FADS2P1A8MWK0 482 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 PRLP01236 227 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 PYGLP06737 847 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 OAS2P29728 719 aaKnown RBP17.31■□□□□ 0.36
RETREG3-212ENST00000593251 TYRO3Q06418 890 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 CDC20Q12834 499 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 PIGHQ14442 188 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-212ENST00000593251 ATP1A1-AS1Q5TC04 95 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 IYDQ6PHW0 289 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 WDR74Q6RFH5 385 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-212ENST00000593251 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 NLRP8Q86W28 1048 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 CATSPER2Q96P56 530 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 TBC1D10AQ9BXI6 508 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 THAP2Q9H0W7 228 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 SARS2Q9NP81 518 aaKnown RBP17.31■□□□□ 0.36
RETREG3-212ENST00000593251 RBM22Q9NW64 420 aaKnown RBP eCLIP17.31■□□□□ 0.364e-8■■■■□ 23.7
RETREG3-212ENST00000593251 VPS18Q9P253 973 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 TUBD1Q9UJT1 453 aa17.31■□□□□ 0.36
RETREG3-212ENST00000593251 CAPN5O15484 640 aaPredicted RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 STK17BO94768 372 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 GJC1P36383 396 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 SSR1P43307 286 aaKnown RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 NIPAL4Q0D2K0 466 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 GALNT2Q10471 571 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 DEFB109BQ30KR1 87 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 ANO6Q4KMQ2 910 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 C16orf46Q6P387 395 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 KDELC2Q7Z4H8 507 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 C9orf43Q8TAL5 461 aaPredicted RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 ARRDC2Q8TBH0 407 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 MAML1Q92585 1016 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 STN1Q9H668 368 aaKnown RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 ARFGAP3Q9NP61 516 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 FBXO8Q9NRD0 319 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
RETREG3-212ENST00000593251 MRPS18BQ9Y676 258 aaKnown RBP17.3■□□□□ 0.36
RETREG3-212ENST00000593251 C1orf232A0A0U1RR37 186 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 A6NCN8 305 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 MATN3O15232 486 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 HLA-DQB2P05538 268 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 ZNF165P49910 485 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 FILIP1LQ4L180 1135 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
RETREG3-212ENST00000593251 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 FAM182AQ5T1J6 154 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 ZNF648Q5T619 568 aaPredicted RBP17.29■□□□□ 0.36
RETREG3-212ENST00000593251 ALG1LQ6GMV1 187 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 LYSMD3Q7Z3D4 306 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 SLC9B2Q86UD5 537 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 CPNE8Q86YQ8 564 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 STARD8Q92502 1023 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 NUP85Q9BW27 656 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 PCDH9Q9HC56 1237 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 PRDM8Q9NQV8 689 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 TMEM184BQ9Y519 407 aaPredicted RBP17.29■□□□□ 0.36
RETREG3-212ENST00000593251 NBASA2RRP1 2371 aa17.29■□□□□ 0.36
RETREG3-212ENST00000593251 POLR1CO15160 346 aaPredicted RBP17.28■□□□□ 0.36
RETREG3-212ENST00000593251 F3P13726 295 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 MAN1A1P33908 653 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 CASRP41180 1078 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 SPINT3P49223 89 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 GFERP55789 205 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 FOXK1P85037 733 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 ABHD18Q0P651 414 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
RETREG3-212ENST00000593251 DPYSL3Q14195 570 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 PAFAH1B3Q15102 231 aaKnown RBP17.28■□□□□ 0.36
RETREG3-212ENST00000593251 CCDC183Q5T5S1 534 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 HENMT1Q5T8I9 393 aaKnown RBP17.28■□□□□ 0.36
RETREG3-212ENST00000593251 HGSNATQ68CP4 663 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 TIGD7Q6NT04 549 aaPredicted RBP17.28■□□□□ 0.36
RETREG3-212ENST00000593251 FAM71BQ8TC56 605 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 ABHD17AQ96GS6 310 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 ZPBPQ9BS86 351 aa17.28■□□□□ 0.36
RETREG3-212ENST00000593251 HERPUD2Q9BSE4 406 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms