RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 CORO1BQ9BR76 489 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 RNF112Q9ULX5 631 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 COMMD10Q9Y6G5 202 aa19.58■□□□□ 0.72
CLIP3-206ENST00000593074 OR1I1O60431 355 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 PGLSO95336 258 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 TSPAN12O95859 305 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 GFAPP14136 432 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 ARSAP15289 507 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 GJA1P17302 382 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 HMGCLP35914 325 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
CLIP3-206ENST00000593074 CDH13P55290 713 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 ZRANB3Q5FWF4 1079 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 RETSATQ6NUM9 610 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 LARP4Q71RC2 724 aaKnown RBP eCLIP19.57■□□□□ 0.72
CLIP3-206ENST00000593074 APCDD1Q8J025 514 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 PIH1D2Q8WWB5 315 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 KCNJ9Q92806 393 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 BADQ92934 168 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 FUBP1Q96AE4 644 aaKnown RBP19.57■□□□□ 0.72
CLIP3-206ENST00000593074 SLC30A3Q99726 388 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 WDR41Q9HAD4 459 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 BATF3Q9NR55 127 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
CLIP3-206ENST00000593074 GALPQ9UBC7 116 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 PKP3Q9Y446 797 aa19.57■□□□□ 0.72
CLIP3-206ENST00000593074 LRRC14BA6NHZ5 514 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 SYCE1LA8MT33 242 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 SUPT3HB4E1H0 165 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 K7ERQ8 282 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 SUPT3HO75486 399 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 GLUD1P00367 558 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 PTGER3P43115 390 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ATP4BP51164 291 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ERVFC1P60507 584 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 FPGSQ05932 587 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 TSNQ15631 228 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 MPPE1Q53F39 396 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 MPP7Q5T2T1 576 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ARMC12Q5T9G4 340 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 BBS7Q8IWZ6 715 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 KBTBD2Q8IY47 623 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 CD200R1Q8TD46 325 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 SLC26A7Q8TE54 656 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ACDQ96AP0 544 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 EID2BQ96D98 161 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ASAH2Q9NR71 780 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 DNAJC15Q9Y5T4 150 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 IRAK3Q9Y616 596 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 PTPRSQ13332 1948 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 A0A0U1RQS6 177 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 KLK8O60259 260 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 CLASP2O75122 1294 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 NIPSNAP2O75323 286 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ECI2O75521 394 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 PRAMEF12O95522 483 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ESR1P03372 595 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 HSPA8P11142 646 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 THOP1P52888 689 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 RPL26P61254 145 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 CACNG1Q06432 222 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 MAPRE2Q15555 327 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ZNF423Q2M1K9 1284 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 KANK2Q63ZY3 851 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 GK5Q6ZS86 529 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 LYSMD3Q7Z3D4 306 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 DHDDSQ86SQ9 333 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 KBTBD6Q86V97 674 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 STK40Q8N2I9 435 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 FBXO39Q8N4B4 442 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 NSUN5Q96P11 429 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 RAD9AQ99638 391 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 ZNF184Q99676 751 aaPredicted RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 SLC46A2Q9BY10 475 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 TM6SF2Q9BZW4 377 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 UTP6Q9NYH9 597 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 TRMT6Q9UJA5 497 aaKnown RBP19.56■□□□□ 0.72
CLIP3-206ENST00000593074 LRCH1Q9Y2L9 728 aa19.56■□□□□ 0.72
CLIP3-206ENST00000593074 PSMD12O00232 456 aaPredicted RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 CDC7O00311 574 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 CCL16O15467 120 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 BAG2O95816 211 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 RPS17P08708 135 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 PFKLP17858 780 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 DPP6P42658 865 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 CSNK1DP48730 415 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 ART3Q13508 389 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 FASTKQ14296 549 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 FAM219BQ5XKK7 198 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 SIDT2Q8NBJ9 832 aaKnown RBP19.55■□□□□ 0.72
CLIP3-206ENST00000593074 SLC22A17Q8WUG5 538 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 C3orf30Q96M34 536 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 CDRT15Q96T59 188 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 C19orf43Q9BQ61 176 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 C1QTNF3Q9BXJ4 246 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 P2RY12Q9H244 342 aa19.55■□□□□ 0.72
CLIP3-206ENST00000593074 MID1IP1Q9NPA3 183 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms