RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
TUBD1-211ENST00000591548 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 AARSD1Q9BTE6 412 aaKnown RBP11.32□□□□□ -0.6
TUBD1-211ENST00000591548 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 SLC2A4RGQ9NR83 387 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 PKD2L2Q9NZM6 624 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 ACOT9Q9Y305 439 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
TUBD1-211ENST00000591548 MYO10Q9HD67 2058 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 CKAP5Q14008 2032 aa11.32□□□□□ -0.6
TUBD1-211ENST00000591548 A0A1W2PQF6 199 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 H0Y858 1186 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PFDN6O15212 129 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 MID1O15344 667 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PLIN3O60664 434 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 WISP3O95389 354 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 GSTA1P08263 222 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 ELFN1P0C7U0 828 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 CD72P21854 359 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 DRD3P35462 400 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PTGER3P43115 390 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 LIG3P49916 1009 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 SUOXP51687 545 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 ADARP55265 1226 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 DLG1Q12959 904 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 SEPT7Q16181 437 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 SETMARQ53H47 684 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 TAF1BQ53T94 588 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 CTSL3PQ5NE16 218 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PIP5KL1Q5T9C9 394 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 FAM46CQ5VWP2 391 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 TMEM207Q6UWW9 146 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 KYAT3Q6YP21 454 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PIM3Q86V86 326 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 CACUL1Q86Y37 369 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 AADATQ8N5Z0 425 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 TXNDC5Q8NBS9 432 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 KCTD4Q8WVF5 259 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 TSPAN17Q96FV3 270 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 MAGEB18Q96M61 343 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 GPR78Q96P69 363 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 ZNF317Q96PQ6 595 aaPredicted RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 WRAP53Q9BUR4 548 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 MKRN2Q9H000 416 aaKnown RBP11.31□□□□□ -0.6
TUBD1-211ENST00000591548 EPN3Q9H201 632 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 P2RY12Q9H244 342 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 FAM83DQ9H4H8 585 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 DYRK4Q9NR20 520 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 TMPRSS11EQ9UL52 423 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
TUBD1-211ENST00000591548 WDR91A4D1P6 747 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 PSMD11O00231 422 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 PROCP04070 461 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 COL6A2P12110 1019 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 PKMP14618 531 aaKnown RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 TAC1P20366 129 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 COL9A1P20849 921 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 ACRV1P26436 265 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 SERPINB4P48594 390 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 DCDC1P59894 354 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 RPS14P62263 151 aaKnown RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 IRX4P78413 519 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 ELP6Q0PNE2 266 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 CCINQ13939 588 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 PDK4Q16654 411 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 SPATA6LQ8N4H0 392 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 ANKRD49Q8WVL7 239 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 FAM3CQ92520 227 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 UBXN10Q96LJ8 280 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 COQ10AQ96MF6 247 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 NFKBIL1Q9UBC1 381 aaPredicted RBP11.3□□□□□ -0.6
TUBD1-211ENST00000591548 GALPQ9UBC7 116 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 SERGEFQ9UGK8 458 aa11.3□□□□□ -0.6
TUBD1-211ENST00000591548 CRLS1Q9UJA2 301 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms