RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 DOK6Q6PKX4 331 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 SLCO6A1Q86UG4 719 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 TRIM74Q86UV6 250 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 COG1Q8WTW3 980 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 ADAMTS14Q8WXS8 1223 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 GLMNQ92990 594 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 MS4A14Q96JA4 679 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 APOLD1Q96LR9 279 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 BOCQ9BWV1 1114 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 TMEM168Q9H0V1 697 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 ETNK1Q9HBU6 452 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 IL26Q9NPH9 171 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 RAB6BQ9NRW1 208 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 KCND1Q9NSA2 647 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 SUFUQ9UMX1 484 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 ARL5AQ9Y689 179 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
LIG3-213ENST00000590630 FREM2Q5SZK8 3169 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 WDFY3Q8IZQ1 3526 aa11.81□□□□□ -0.52
LIG3-213ENST00000590630 ASPMQ8IZT6 3477 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 GOLGA6L10A0A0M3HER8 536 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 GLYATL1P3A0A0U1RQE8 302 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 GPR89AB7ZAQ6 455 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 STX7O15400 261 aaKnown RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 RFPL3O75679 317 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 SUN1O94901 812 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 SLC25A14O95258 325 aaPredicted RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 FUCA1P04066 466 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 CELA2BP08218 269 aaPredicted RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 GPR89BP0CG08 455 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 ETS1P14921 441 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 RPL22P35268 128 aaKnown RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 GNPDA1P46926 289 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 KCNJ1P48048 391 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 POLD2P49005 469 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 RPIAP49247 311 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 LMAN1P49257 510 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 DUSP3P51452 185 aaPredicted RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 SHC2P98077 582 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 ILF3Q12906 894 aaKnown RBP eCLIP11.8□□□□□ -0.52
LIG3-213ENST00000590630 DNAJC3Q13217 504 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 PEX6Q13608 980 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 ITGA9Q13797 1035 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 LRP8Q14114 963 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 CYP1B1Q16678 543 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 RAB44Q7Z6P3 723 aaPredicted RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 TAB3Q8N5C8 712 aaPredicted RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 GLIS1Q8NBF1 620 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 GPBAR1Q8TDU6 330 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 GLYATL1Q969I3 302 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 MAGOHBQ96A72 148 aaKnown RBP11.8□□□□□ -0.52
LIG3-213ENST00000590630 GSDMCQ9BYG8 508 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 RMI1Q9H9A7 625 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 TMEM98Q9Y2Y6 226 aa11.8□□□□□ -0.52
LIG3-213ENST00000590630 LY6G6EA0A0G2JKS1 128 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 BUD23O43709 281 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 ASMTLO95671 621 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 GAS8O95995 478 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 GP1BAP07359 652 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 APRTP07741 180 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ZSCAN5DPP0CG00 497 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ADCY8P40145 1251 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 HADHAP40939 763 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ZNF140P52738 457 aaPredicted RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 CDH17Q12864 832 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 FOXC1Q12948 553 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 NR0B2Q15466 257 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 TCEA2Q15560 299 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 PYCR3Q53H96 274 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 FAM151BQ6UXP7 276 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 TAF8Q7Z7C8 310 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 GALNT13Q8IUC8 556 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ARL10Q8N8L6 244 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 OR4K2Q8NGD2 314 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 PTCD2Q8WV60 388 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 OR2M4Q96R27 311 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 AP1M1Q9BXS5 423 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 TRIM39Q9HCM9 518 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 EIF2B3Q9NR50 452 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 SMOXQ9NWM0 555 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 APPL1Q9UKG1 709 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 ANGPTL2Q9UKU9 493 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 GPR34Q9UPC5 381 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 WASF3Q9UPY6 502 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 OAS3Q9Y6K5 1087 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 U3KQA8 63 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 TPRP12270 2363 aaKnown RBP11.79□□□□□ -0.52
LIG3-213ENST00000590630 ACACBO00763 2458 aa11.79□□□□□ -0.52
LIG3-213ENST00000590630 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms